multiple alignment file format?

[Don Gilbert]

For sequence file formats, you often have to go to the
originator if you want gory details of their specification,
but for working purposes,
various software does this already and you can borrow others
methods.

For one set of sequence reformatters, see
  ftp://iubio.bio.indiana.edu/molbio/readseq
  -- classic/ has some of this information, and c code you can use
  -- java/  newer version, see also
    http://iubio.bio.indiana.edu/cgi-bin/readseq.cgi?help

For another set, with some more formats, see
 ftp://ftp.uk.embnet.org/pub/EMBOSS/
 a large package in C, including sequence reformaters and examples

--
-- d.gilbert--bioinformatics--indiana-u--bloomington-in-47405
-- gilbertd at bio.indiana.edu