Human codon usage

Fr. Des fatherdes at hotmail.com
Thu Sep 21 09:13:50 EST 2000


In article <etdsnqvqm9f.fsf at x15-cruise-basselope.mit.edu>,
  Alex <cut_me_out at hotmail.com> wrote:
>
> > I'm looking for a suitable piece of software that I can enter my
human
> > coding sequence into and it will give me an idea of the possible
> > expression level in humans by using a codon bias table and a
suitable
> > mathmatical formula.
>
> The expression level of a gene isn't directly related to the codons it
> contains, is it?
>

It is strongly related in many organims (yeast, E.coli being the classic
ones) but NOT humans, as it turns out.

Des Higgins


> Alex.
>
> --
> Speak softly but carry a big carrot.
>
>


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