ESTs, ORFs and curated databases

[Alan Bleasby]

In article <15020.40008.691662.957167 at chevrotain.mips.biochem.mpg.de>,
	rudd at mips.biochem.mpg.de (Stephen Rudd) writes:
> Bioinformaticians,
> 
> kindly point me in the right direction ? Tools such as EMBOSS getseq
> often identify the wrong sequences and the cDNA sequences can be ugly !

There was a problem with getorf in EMBOSS but that was fixed a couple
of releases ago. I wasn't aware of any problem with getseq but if
you have any examples we'd be grateful if you'd email
emboss-bug at embnet.org and we'll fix it asap.

Rgds

Alan