structure superimposition

[Lieven Buts]

Markus Fischer wrote:
> Does anybody know about a command line orientated tool for superimposing
> protein structures on Linux? For the superimposition I'd like to use not
> only c-alpha atoms but also any type of atom pairs.

I haven't used it myself, but I hear LSQMAN 
(http://alpha2.bmc.uu.se/usf/lsqman_man.html), provided
by the Uppsala Software Factory (http://alpha2.bmc.uu.se/usf/)
can do this.


-- 
Lieven Buts
Vrije Universiteit Brussel

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