Cloning Software

David Mathog mathog at caltech.edu
Mon Jun 2 03:59:06 EST 2003


On 21 May 2003 18:15:38 +0100
Charlie <cckim at stanford.edu> wrote:

> I am mostly just
> interested in the cloning tools

If you just need cloning tools then you should definitely have
a look at CloneIt.  The web server version is here:

http://genome.jouy.inra.fr/cgi-bin/CloneIt/CloneIt

You can obtain the program itself to run locally
by following a link from that site.

> 
> The limiting factor is that I don't want to do this all myself.  I would
> like to do the project in Perl because of the many tools already available
> through Bioperl.

Or maybe just use EMBOSS?  (www.emboss.org)  The base package isn't
wrapped up in a pretty GUI but pretty much all the tools are there.
That said, there are some web and gui interfaces in the works,
poke around on their web site for more info.

Regards,

-- 
David Mathog
mathog at caltech.edu
Manager, Sequence Analysis Facility, Biology Division, Caltech
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