TIGR Help

Axel Foley ivaylo.hristov at abv.bg
Tue Jul 27 06:49:34 EST 2004


I am having a problem running TGICL on multiple computers. 
And I will really appreciate any help. 
So this is the situation :
I have 3 linux machines running Fedora core 1. 
One of them I use for server. The others are clusters. On the server I
created folder /tgicl
And I installed the TGICL in it. 
I shared this /tgicl folder with nfs, on every of the other two
computers I mounted the folder that is on the server on the same point
in the file system (/tgicl)
I started TGICL (tgicl all_fasta.seq -c nodes), where nodes is the
following file:
10.0.52.100 /tgicl/
10.0.52.101 /tgicl/

It seems that everything is working just fine in the beginning and on
all computers is started prcess “mgblas” that is producing
files :
all_fasta_1.seq_ at 1_v0.1.tab.Z
all_fasta_1.seq_ at 1001_v0.2.tab.Z
all_fasta_1.seq_ at 2001_v0.3.tab.Z
all_fasta_1.seq_ at 3001_v0.4.tab.Z
all_fasta_1.seq_ at 4001_v0.5.tab.Z

when all the work of “mgblast” is done it seems that there
is a problem with combining the files in the
“all_fasta_1.seq_clusters”
The error I get from TGICL is “Error: cluster file
'all_fasta_1.seq_clusters' is missing or empty.”
The file is there but is absolutely empty. 

Can you help me. 

Thanks:
    Ivaylo Hristov
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