software for chromatine ImmunoPrecipitation

florent crepineau florent.crepineau at laposte.net
Mon Sep 6 05:39:15 EST 2004


Dear all,

I am involved in the analysis of sequences obtained after
CHromatin ImmunoPrecipitation (CHIP) in the mouse.
Thoses sequences are short chromosomal sequences (200bp). What
I am looking for is a software that would blastN the
sequences, get the chromosomal location and identify the
nearest genes and retrieve a longer sequence so I can look for
transcription factor binding sites.

Does that exist ?

Best regards

Florent Crépineau

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