JAligner version 0.8 released - sequence alignment

Ahmed Moustafa ahmed at users.sourceforge.net
Mon Sep 6 05:45:37 EST 2004


<http://jaligner.sourceforge.net> JAligner 
<http://jaligner.sourceforge.net> is an open source Java implementation 
of Smith-Waterman algorithm for biological sequence alignment.

The new release includes several major user interface (GUI) enhancements:

    * Executing as a desktop application as well as a JNLP-based.
    * Editing capabilities for the input sequences.
    * Interaction with the system clipboard (copy, cut and paste).
    * Detailed logging for actions and errors.

In addition, the new release supports input sequences in plain text (no 
format) besides the FASTA format.

Your comments, questions and suggestions are welcome!

--
Ahmed Moustafa
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