[Bio-software] Re: Bio-soft Digest, Vol 29, Issue 7

Amit Dattatreya Parhar via bio-soft%40net.bio.net (by amit.p from ocimumbio.com)
Mon Oct 29 23:39:38 EST 2007


Blast Output parser in C++

Dear Abhishek,

There are many blast parsers available . Here are the links for codes in
JAVA, C and PERL

http://www.hip.harvard.edu/informatics/programs/JAVA%20BLAST%20Parser.html

http://bioinfo.iq.usp.br/zerg/

http://www.bios.niu.edu/johns/bioinform/perl_blast_parser.htm

Amit
Bioinformatics Analyst
amit.p from ocimumbio.com


----- Original Message ----- 
From: <bio-soft-request from oat.bio.indiana.edu>
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Sent: Monday, October 29, 2007 10:34 PM
Subject: Bio-soft Digest, Vol 29, Issue 7


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>    1. Blast Output parser in C++ (Abhishek Nayak)
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> Message: 1
> Date: Mon, 29 Oct 2007 12:24:29 +0530
> From: Abhishek Nayak <abhishek.nayak from atc.tcs.com>
> Subject: [Bio-software] Blast Output parser in C++
> To: bio-soft from magpie.bio.indiana.edu
> Message-ID: <1193640869.2894.20.camel from localhost.localdomain>
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> Hi,
>    Dose anyone knows of a Blast output Parser whose source code is
> written in C++ and is a open source.
> I am in great need of it. If anyone knows of it please reply back.
>
> Regards,
> Abhishek Nayak
>
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