[Bio-software] Regarding Cluster of orthologus group for viral families

Amitabh Gupta via bio-soft%40net.bio.net (by amitabh_gupta07 from yahoo.co.in)
Thu Apr 17 05:43:45 EST 2008


   Hello sir,


   Hope you are fine


   Myself Amitabh Gupta, final year BTech Biotechnology student at JIIT
   Uni= versity, India. In my ongoing final year project I applied
   pylogenetic prof= iling on proteome set of viruses belong to
   Flaviviridae family. For further= improvement of my approach and
   cross-validation of result obtained, I= need the sequnces of viral
   cluster of orthologus group (VOG) of Flavivirid= ae family.

   Please suggest me how I will get desired sequences from N= CBI
   because ftp of VOG not available currently. If you will provi= de me
   any Perl script which suitable for generating COG for viral fami   lies, its really helpfull for further progress of my project.


   Regards,

   Amitabh Gupta

   BTech Biotechnolgy - IVth Year

   JIIT University, Noida

   


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References

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