[Bio-software] e-value

chunnu via bio-soft%40net.bio.net (by sanjaysingh765 from gmail.com)
Sat Oct 18 10:28:09 EST 2008


hi all,
i have a set of arabidopsis genes ( approx. 100 ) and want to point
out their orthologs from oryza sativa.Can anyone suggest me the best
method to do this...I was thinking about reciprocal best Basic Local
Alignment Search Tool hits (RBH) but I was confused about the
parameters especially for e-value.Plz sugggest me the optimal e-value
for oorthologs and homologs identification
regards



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