[Bio-software] RE: Data structure for protein

Seth Johnson via bio-soft%40net.bio.net (by seth from seth-johnson.net)
Sun Jun 7 12:32:24 EST 2009


Your best bet is PDB format. Google it up, it gives coordinates and such for each aa.

-----Original Message-----


Message: 1
Date: Sun, 07 Jun 2009 06:57:35 +0100
From: Sujita Purushothaman <sujita from skhot.net>
Subject: [Bio-software] Data Structure for protein
To: bio-soft from net.bio.net
Message-ID: <4A2B56CF.10102 from skhot.net>
Content-Type: text/plain; charset=ISO-8859-1; format=flowed

Hi,
  I'm writing a program which has to hold information about the 3d
structure of a protein, and make modifications to the coordinates. I was
wondering if anyone can comment on suitable data structures that can be
used for this, pros and cons?

Thanks in advance!

-Sujita









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