[Bio-software] How to get test data for fragment sequence assembly?

ssj from tce.edu via bio-soft%40net.bio.net (by ssj from tce.edu)
Fri Apr 9 04:24:04 EST 2010


Hi all,
I am a Computer Engineering graduate. But, I work on optimizing fragment
sequence assembly. I have considered strands from both strands, base call
errors like insertion, deletion and modification right now. The algorithm
is tested with sample data, what i have generated without errors.It works
fine. I would like to test the algorithm with real-time data with and
without errors and the fragments should be from both the strand.Please
suggest me the way how to get the real-time data to test my algorithm?

Greetings,
S.Sudha
(Thiagarajar College of Engineering, India)


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Thiagarajar College of Engineering
Madurai-625 015, India



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