Retrieving features with SRS : the problem

Tylzanowski Przemko przemko
Wed Sep 27 07:33:27 EST 1995


gbottu at ben.vub.ac.be (Guy Bottu) wrote:
>SRS allows to retrieve parts of sequences corresponding to features
>mentioned in the documentation. However, it does not work entirely
>satisfactorily :
>
>- with the WWW interface : if you select "sequenceFeatures" in the
> pull-down menu of the QueryForm, SRS does generate separate entries
> for each feature, but it contains the complete sequence, not just the
> feature.
Not really, if you try to ask for "show-sequenceFeatures" instead of
"entries"(default). Then you get only the sequence of the feature. It will
happen if, after getting the list of hits you ask for "complete entries". If on
the search page you have asked for SequenceFeature that you will get features
only.

>- with the srscurses and the srstk interfaces : if the sequence
> contains several features of the same type, SRS retrieves files
> with the entries put the one behind the other (what makes
> that they cannot be taken as input by software as GCG).
>
I think that if you save it in the GCG format, you will get it the right way. I
have encountered another problem here. I do the search, get a result, ask-List
entries and I get a list. BUT, if I want to see antry I get an empty page. Also
if I try to copy the set I get an empty file

Przemko





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