need help

Jean-Marc Plaza plaza at infobiogen.fr
Tue Jan 5 03:54:57 EST 1999


hello,
I find a problem when indexing embl 57 in srs
for the feature PID only(ftpid).
The srsbuild crashes with the -m option which Merge index partitions
to a single index:

....
+ time srsbuild EMBL -c -f  pid -xdir SRSINX: -odir SRSINX:
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_1.ids"

         size: 1 kbytes, IDs: 0
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_2.ids"

         size: 1 kbytes, IDs: 0
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_3.ids"

         size: 1 kbytes, IDs: 0
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_4.ids"

         size: 5 kbytes, IDs: 662
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_5.ids"

         size: 1 kbytes, IDs: 1
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_6.ids"

         size: 1 kbytes, IDs: 0
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_7.ids"

         size: 1 kbytes, IDs: 1
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_8.ids"

         size: 4 kbytes, IDs: 557
...wrote IDs file "/env/lovelace/env_ibg/pack/srs5/index/embl_pid_9.ids"

         size: 129 kbytes, IDs: 21459
...wrote IDs file
"/env/lovelace/env_ibg/pack/srs5/index/embl_pid_10.ids"
         size: 61 kbytes, IDs: 10043
...wrote IDs file
"/env/lovelace/env_ibg/pack/srs5/index/embl_pid_11.ids"
         size: 598 kbytes, IDs: 99591
...wrote IDs file
"/env/lovelace/env_ibg/pack/srs5/index/embl_pid_12.ids"
         size: 1144 kbytes, IDs: 190535
...wrote IDs file
"/env/lovelace/env_ibg/pack/srs5/index/embl_pid_13.ids"
         size: 253 kbytes, IDs: 42043
...program "srsbuild" completed successfully.

real        4.6
user        0.9
sys         1.0


+ time srsbuild EMBL -m -f  pid -xdir SRSINX: -odir SRSINX:
time: command terminated abnormally.



Could someone give me a clue?


Thanks for your help in advance


Jean-Marc

--
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Jean-Marc PLAZA
INFOBIOGEN - CNRS
7, rue Guy Moquet BP8 94801 VILLEJUIF Cedex, France
tel: +33 45 59 52 39  fax: +33 45 59 52 50
e-mail: plaza at infobiogen.fr
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