Problems with subentries

Peter Rice pmr at sanger.ac.uk
Thu Nov 25 12:44:34 EST 1999


Tim Cutts <timc at chiark.greenend.org.uk> writes:

> I'm trying to write a parser for SRS 5.1 for a databank which has two
> distinct types of subentry.  Ideally I would like to keep these separate
> as two subentry databases.
>
> But this doesn't work!
> 
> Whichever one I put first works, and the second one is ignored.

I seem to recall this is one of those things that refused to work in
SRS 5.1 but could be done in 6.0, for example (srs6 swissprot.i) :

$SWISSPROT_DB=$Library:[SWISSPROT group:$SEQUENCE_LIBS 
  subEntries:{ 
     $SwissprotReference_DB 
     $SwissprotComments_DB 
     $SwissprotFeatures_DB
     $SwissprotCounter_DB
    } 

Another one was getz '@file.list' which was long on my most wanted list
but does work again in 6.0


-- 
----------------------------------------------------------------------
Peter Rice                | Informatics Division, The Sanger Centre,
E-mail: pmr at sanger.ac.uk  | Wellcome Trust Genome Campus,
Tel: (44) 1223 494967     | Hinxton, Cambridge, CB10 1SA, England
Fax: (44) 1223 494919     | URL: http://www.sanger.ac.uk/Users/pmr/





More information about the Bio-srs mailing list