[SE] WWW-Query server
"GuyPerriere"perriere at evol10.univ-lyon1.fr.univ-lyon1.fr
"GuyPerriere"perriere at evol10.univ-lyon1.fr.univ-lyon1.fr
Fri Jul 21 04:37:59 EST 1995
WWW-Query: a World-Wide Web server for accessing sequence data
banks and performing multivariate analysis
We announce the availability of WWW-Query, a World-Wide Web
server for accessing sequence collections indexed with ACNUC and
for performing multivariate analyses on sequences. General
collections like GenBank or EMBL can be accessed, as well as
specialized data banks like Hovergen or NRSub. The home page of
the server can be reached at the following URL:
http://acnuc.univ-lyon1.fr/
Indexation with ACNUC makes possible the building of queries
using many criteria to retrieve sequences. Criteria are based on
mnemonics, accession numbers, keywords, taxonomic data,
bibliographic references, dates of insertion in the bank, the
nature of the genome from which a sequence has been obtained,
etc. Also, the notion of subsequence introduced in ACNUC allows
to retrieve idependently genomic fragments of biological
interest like CDS, tRNAs, rRNA, snRNAs, etc.
The result of each query is represented by a list of sequences
and this list is temporarily stored in our server. By this way,
it is possible to re-use a previous list to build more complex
queries or to perform treatments on a set of sequences. Up to
now, these methods consist mainly in programs for performing
multivariate analyses on the CDS or the proteins. These methods
are: Principal Component Analysis (PCA), COrrespondence Analysis
(COA), and Multiple Correspondence Analysis (MCA).
If you have any questions, feel free to ask me (preferably by
Email) at the following address:
Guy Perriere
Laboratoire de Biometrie, Genetique et
Biologie des Populations, URA CNRS 2055
Universite Claude Bernard - Lyon 1
43, bd. du 11 Novembre 1918
69622 Villeurbanne Cedex
France
Email: perriere at biomserv.univ-lyon1.fr
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