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screening for dinucleotide/trinucleotide repeats in sequence

Gorry, Mike gorrym at cpc.pitt.edu
Tue May 23 10:24:45 EST 2000


Is anyone aware of a program/algorithm available that will screen large
segments of 
sequenced DNA (BACs or PACs) for dinucleotide/trinucleotide repeats that
have not 
already been identified?  I have tried checking over the internet but have
not come up with
anything.  Pubmed didn't yield anything either.  The only solution at hand
is to use the FIND
function to screen each BAC for the desired patterns.  This could take
forever.  Any information
will be appreciated.

Thanks 

Michael Gorry
gorrym at cpc.pitt.edu

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