new software to search for consecutive repeat patterns in dna

Roman Roset r.roset at menta.net
Mon Oct 28 07:25:32 EST 2002


Hello,
        ALGGEN group has developed a new software to search for
consecutive repeat patterns in dna sequences: MREPATT.
        At the moment MREPATT is a beta version, without help, 
but it's completely  functional.
        With this software you can:
                . View the visual map of the ocurrences and zoom regions.
                . View different matching about:
                        . Chromosomic stathistical distribution .
                        . Number of ocurrences for each repetition
                        . Number of theoretical ocurrences for each repetition
                        . Differents plots about the search

        If you are interested about it and you would test this soft,
you can do it at:
        http://www.lsi.upc.es/~alggen
and then in the menu look for:
        --> research
                --> search
                        --> mrepatt

        Any suggestion or question are wellcome and you can send it to:
                rroset at lsi.upc.es

Thanks




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