Sheep mitochondrial genome
Bruce Roe
broe at aardvark.ucs.uoknor.edu
Mon Oct 18 07:43:00 EST 1993
In article <1993Oct16.144745.20324 at dmp.csiro.au>, lachlan at dmp.csiro.au (Lachlan Cranswick) writes...
>broe at aardvark.ucs.uoknor.edu (Bruce Roe) writes:
>
>>In article <28tvu7INN6o7 at newsman.csu.murdoch.edu.au>, cummins at possum.murdoch.edu.au (Jim Cummins) writes...
>>>
>>>Does anyone know of a reference to the complete mitochondria lDNA
>>>sequence for the sheep?
>>>Jim Cummins
>>>School of Veterinary Studies
>
>>gb|J01394|BOVMT Bovine mitochondrion, complete genome.
>>gb|V00654|MIBTXX Complete bovine mitochondrial genome.
>>gb|X61145|MIBPCG B.physalus mitochondrial DNA, complete genome.
>>gb|X63726|MIPVDNA P.vitulina mitochondrial DNA, complete genome.
>>gb|J01415|HUMMTCG Human mitochondrion, complete genome.
>
>
>Sorry if this is a silly question but a friend is interested
>in obtaining the Human Mitochondrion Genome. What software/
>information server do you use to obtain this information?
>Is there an FAQ on this somewhere?
>
>He would also be interested in obtaining information
>on or about mutations resulting in respiratory chain defects.
>
>Thanks in advance,
>
>Lachlan.
>--
>Lachlan Cranswick - CSIRO _--_|\ lachlan at dmp.CSIRO.AU
>Division of Mineral Products / \ tel +61 3 647 0367
>PO Box 124, Port Melbourne \_.--._/ fax +61 3 646 3223
>3207 AUSTRALIA v
Lachlan,
I strongly recommend that you get your friend a copy of
A Biologist's Guide to Internet Resources
Version 1.6, 23 August 1993
by
Una Smith Department of Biology smith-una at yale.edu
Yale University
New Haven, CT 06511 USA
Here's the info on how to obtain this EXCELLENT document
-*- 1.2. How to Get Updates
This guide is updated more-or-less monthly. The most current version
is available via Usenet, gopher, FTP and e-mail. Please do not ask the
author to send you a copy, nor refer others to the author.
- In Usenet, look in sci.bio or sci.answers.
- Gopher to sunsite.unc.edu, and choose this sequence of menu items:
Sunsite Archives
ecology+evolution
Or, from any gopher offering other biology gophers by topic, look for
the menu item "Ecology and Evolution [at UNC and Yale]". The guide is
stored there in two ways: as a file for easy retrieval and as a menu
for browsing.
- FTP to rtfm.mit.edu. Give the username "anonymous" and your e-mail
address as the password. Use the "cd" command to go to the directory
pub/usenet/news.answers/biology/
and use "get guide" to copy the file to your computer. The file is
actually stored as guide.Z, which is a compressed binary file, but if
you specify "guide" it will be uncompressed and translated to readable
ASCII before it is transfered to your computer. You can also use
anonymous FTP to sunsite.unc.edu, where this guide is stored as
pub/academic/biology/ecology+evolution/FAQ.
- Send e-mail to mail-server at rtfm.mit.edu with the text
"send usenet/news.answers/biology/guide". Because the guide is long,
you will probably receive it in parts: save each part separately,
delete the e-mail headers, and merge them.
--------------------------------------------------------------------------
As for the Human Mitochondrial Genome sequence, there are lots
of ways, through Gopher to John's Hopkins or IUBIO, via NCBI retrieve,
by using the fetch command from GCG if you have a local copy of the Genbank
and/or EMBL databases and GCG's programs installed, to name just a few.
In this instance, since I was one of the co-authors on this paper, I'll
e-mail you a copy of the sequence separately.
As for:
>He would also be interested in obtaining information
>on or about mutations resulting in respiratory chain defects.
Someone else will have to help you there.
Cheers......bruce
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\ Bruce A. Roe Professor of Chemistry and Biochemistry /
/ Dept. of Chem. and Biochem. INTERNET: BROE at aardvark.ucs.uoknor.edu \
\ University of Oklahoma BITNET: BROE at uokucsvx /
/ 620 Parrington Oval, Rm 208 AT&TNET: 405-325-4912 or 405-325-7610 \
\ Norman, Oklahoma 73019 FAXnet: 405-325-6111 /
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