NCBI Result Search
bal at KB.USM.MY
Mon Apr 11 23:59:45 EST 1994
After several times trying to understand the result search
returned by NCBI, I could not interpreated the outcome of the search. I would
be a very happy man if somebody out there could help me in understanding
At what point do you consider that your sequence is significant ?
Below is the first five listing of the search.
Sequences producing High-scoring Segment Pairs: Score P(N) N
sp|P23745|ABRA_PLAFG 101 KD MALARIA ANTIGEN (P101) (ACI... 69 6.8e-11 3
sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN PRECURSOR (... 69 1.1e-10 3
sp|P13816|GARP_PLAFF GLUTAMIC ACID-RICH PROTEIN. >gp|J0... 82 2.5e-09 4
sp|P35352|CAR3_DICDI CYCLIC AMP RECEPTOR 3. >pir|A46391... 68 1.0e-08 4
pir|A42239|A42239 adenylate cyclase (EC 220.127.116.11) ger... 59 6.4e-08 4
>sp|P23745|ABRA_PLAFG 101 KD MALARIA ANTIGEN (P101) (ACIDIC BASIC REPEAT
Length = 600
Another thing is the Third Part of the search result. Could you also
explain this too.
Score = 69 (30.4 bits), Expect = 1.0, P = 0.64
Identities = 14/67 (20%), Positives = 36/67 (53%)
Query: 23 NNHESDDNNSIENSYEESAMYDENNSSIHDDNSKKEKFSDNEKYHERAEEEIVSDDLYQE 82
N +E++DN + +E + DE +++ +D + +E +D+E ++ + D +E
Sbjct: 130 NQNENNDNQKYQEVNDEDDVNDEEDTNDDEDTNDEEDTNDDEDTNDDEDTNDEEDTNDEE 189
I hope after getting an explaination, I could interpreate the search
result myself or any search result in the future.
Thank You in Advance!!!
Medical Microbiology & Parasitology Department,
School of Medical Sciences,
Universiti Sains Malaysia,
16150 Kubang Kerian,
Tel: 66 09 9402123
E-Mail : bal at kb.usm.my
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