codon usage in E. coli

Keith Robison robison at mito.harvard.edu
Fri Feb 9 12:38:13 EST 1996


Fred de Lamotte (Lamotte at montpellier.inra.fr) wrote:
: Hello, I am looking for info about the codon usage bias in E.coli.
: I have a table produced by J. M. Cherry in 92 based on 6 genes found in
: GenBank 63. I was woundering if any updateŠ

You can find some useful codon usage resources via

	http://golgi.harvard.edu/sequences.html#codons

CUTG (http://www.dna.affrc.go.jp/~nakamura/CUTG.html) will 
certainly have what you alre looking for; they have tables
for 5349 organisms!

Enjoy!

Keith Robison
Harvard University
Department of Molecular & Cellular Biology
Department of Genetics 

robison at mito.harvard.edu 





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