New genbank/vector option on FASTA server

Dave Kristofferson kristoff at genbank.bio.net
Fri Apr 24 11:27:33 EST 1992


It is now possible to use the GenBank On-line Service FASTA-MAIL
server to check your sequences for vector contamination prior to
submission to the databanks.  The option genbank/vector should be
listed on the DATALIB line of your submission to the server.  Please
send the word HELP to search at genbank.bio.net for complete
instructions on using FASTA-MAIL.

This release should be considered a beta test.  There are still
prominent omissions from the vector file such as lambda gt11 which we
are trying to fill.  Thus the fact that you receive no matches against
your intended databank submission does not necessarily mean that your
sequence is completely free of contamination.  A list of the vectors
currently in the file follows below.  Please feel free to notify us of
vectors which you do not find in the database.  The compressed file
vector.seq.Z is also available for anonymous FTP from genbank.bio.net
[134.172.1.160] in pub/db/vector.seq.Z.  Thanks to Paul Gilna and
co-workers for assembling the data.

				Sincerely,

				Dave Kristofferson
				GenBank Manager

				kristoff at genbank.bio.net

----------------------------------------------------------------------
DEFINITION  cDNA expression vector RSV.5(neo).
DEFINITION  Yeast secretion vector inserted with mouse amylase gene, pSMF38TMA,
DEFINITION  pBluescript II KS(+) vector DNA, phagemid excised from lambda ZAPII
DEFINITION  pBluescript II KS(-) vector DNA, phagemid excised from lambda ZAPII
DEFINITION  Cloning vector pJMSP-8 polylinker sequence (SP6 polymerase
DEFINITION  pBluescript SK(+) vector DNA, phagemid excised from lambda ZAP
DEFINITION  Cloning vector pGEM3 (pJMSP-0) polylinker sequence (SP6 polymerase
DEFINITION  pBluescript SK(-) vector DNA, phagemid excised from lambda ZAP
DEFINITION  pBluescript II SK(+) vector DNA, phagemid excised from lambda ZAPII
DEFINITION  pBluescript KS(-) vector DNA, phagemid excised from lambda ZAP
DEFINITION  Artificial cloning vector plasmid BD64
DEFINITION  Cloning vector pJOE810 polylinker DNA.
DEFINITION  Cloning vector pKYLX6 35S, promotor region.
DEFINITION  Cloning vector pT7E19(+) polylinker DNA (pUC19 derivative).
DEFINITION  Cloning vector RSV.5(gpt).
DEFINITION  Yeast expression vector inserted with mouse amylase gene, pSMF69MA,
DEFINITION  Cloning vector pLXSH from Moloney murine leukemia virus, complete
DEFINITION  Cloning vector pZP19 (modified pUC19) BsmI insertion site.
DEFINITION  Plasmid vector pTrS3 carrying E.coli trp promoter, SD sequence and
DEFINITION  Plasmid pHY163PLK, shuttle vector for Escherichia coli and Bacillus
DEFINITION  Plasmid vector pSU 8
DEFINITION  Plasmid vector pSU 23
DEFINITION  Cloning vector pATH10, propagated in E.coli.
DEFINITION  Cloning vector pATH11, propagated in E.coli.
DEFINITION  Plasmid vector pSU 36
DEFINITION  Cloning vector pEZZ18 fusion gene, partial cds.
DEFINITION  Cloning vector pBLCAT5 encoding thymidine kinase promoter and
DEFINITION  Cloning vector pKP497 (cloning, screening, fusion vector) encoding
DEFINITION  pBluescript II SK(-) vector DNA, phagemid excised from lambda ZAPII
DEFINITION  Cloning vector pBD7 sequence fragment.
DEFINITION  pBluescript KS(+) vector DNA, phagemid excised from lambda ZAP
DEFINITION  Cloning vector pX1 with T7 promoter sequence DNA.
DEFINITION  hsp70-white P-element vector plasmid pW8 polylinker DNA sequence
DEFINITION  Bacterial expression vector pUEX with universal host specifity.
DEFINITION  Moloney murine leukemia virus retroviral vector pLHDCX, complete
DEFINITION  Cloning vector plasmid pBR322, complete genome.
DEFINITION  Cloning vector M13mp18
DEFINITION  BlueScribe cloning vector.
DEFINITION  Cloning vector pTL-8 mRNA, partial cds.
DEFINITION  Cloning vector pBLCAT6 encoding chloramphenicol acetyltransferase
DEFINITION  Moloney murine leukemia virus retroviral vector pLXSHD, complete
DEFINITION  Cloning vector pEZZ18 (bacterial, cloning, expression, secretion,
DEFINITION  Complete sequence of transformation vector pPI25.1.
DEFINITION  Friend murine leukemia virus retroviral vector pFR-SV(X), complete
DEFINITION  Sequencing vector pAA113M DNA.
DEFINITION  Shuttle vector consisting of DNA from E.coli and yeast.
DEFINITION  Shuttle vector consisting of DNA from E.coli and yeast.
DEFINITION  Plasmid pJSC73 (from pBR325 and pAT153), vector for blunt-end
DEFINITION  Cloning vector lambda-gt11 DNA sequence of SacI-KpnI region.
DEFINITION  Plasmid cloning vector pSKS105, lacZ fragment (pUC8/pMC1403).
DEFINITION  Plasmid cloning vector pSKS106, lacZ fragment (pUC9/pMC1403).
DEFINITION  Plasmid cloning vector pFR10, lacZ fragment (pCV1/pSKS106).
DEFINITION  Cloning vector pEMBL 8 plus (pEMBL8p).
DEFINITION  Cloning vector pEMBL 8 minus (pEMBL8m).
DEFINITION  Cloning vector pSU2718 DNA.
DEFINITION  Cloning vector pPD26.14 for C. elegans
DEFINITION  Cloning vector pAST 18a for C. elegans
DEFINITION  Cloning vector PSU2719 DNA.
DEFINITION  Cloning vector pAST 19a for C. elegans
DEFINITION  Cloning vector pAST 19b for C. elegans
DEFINITION  Cloning vector pTL61T, complete sequence.
DEFINITION  Cloning vector pUC19 high copy number plasmid, complete genome.
DEFINITION  plasmid pi-vx (used for screening bacteriophage lambda).
DEFINITION  pUC19 cloning vector.
DEFINITION  Plasmid cloning vector pSKS104, lacZ fragment (pUC7/pMC1403).
DEFINITION  Cloning vector plasmid pJRD158 DNA, complete genome.
DEFINITION  Moloney murine leukemia virus retroviral vector pZIP-SV(X),
DEFINITION  Cloning vector RSV3.
DEFINITION  Synthetic cloning vector (yeast-bacteria) pSK-kan1105
DEFINITION  Shuttle vector for Escherichia coli and Bacillus subtilis, plasmid
DEFINITION  Synthetic cloning vector plasmid pHSG664, complete genome.
DEFINITION  Synthetic cloning vector DNA.
DEFINITION  pOTS-myc human c-myc expression vector.
DEFINITION  Vector plasmid pLTRpoly DNA
DEFINITION  Cloning vector pAST 18b for C. elegans
DEFINITION  Cloning vector pEX2
DEFINITION  Cloning vector DNA, clone pTO-N.
DEFINITION  Cloning vector pBend2 poly-linker region.
DEFINITION  Cloning vector pICT19r for C. elegans
DEFINITION  Cloning vector pICT19h for C. elegans
DEFINITION  Synthetic cloning vector (yeast-bacteria) pSK-kan401 aminiglycoside
DEFINITION  Synthetic cloning vector (yeast-bacteria) pSK-kan1238
DEFINITION  Expression vector pUXV DNA.
DEFINITION  Cloning vector M13JN72 containing mutliple cloning site.
DEFINITION  Lambda gt11 lac operon and phage junction.
DEFINITION  cwCloning vector M13plex01 beta-galactosidase pseudogene.
DEFINITION  Cloning vector M13plex05 beta-galactosidase pseudogene.
DEFINITION  Cloning vector pMMB206 beta lactamase (bla, truncated), 3' end.
DEFINITION  Plasmid cloning vector pMC1843, lacZ fragment (pMC1403/pSKS101).
DEFINITION  Plasmid pBRG 1214 tetracycline (tet) resistance gene fragment
DEFINITION  Chimeric plasmid, mouse interferon-beta (IFN-beta) cDNA fused to
DEFINITION  Cloning vector M13plex13 beta-galactosidase pseudogene.
DEFINITION  Cloning vector M13plex06 beta-galactosidase pseudogene.
DEFINITION  Cloning vector M13plex00 beta-galactosidase pseudogene.
DEFINITION  Chimeric plasmid, mouse interferon-beta (IFN-beta) cDNA fused to
DEFINITION  Cloning vector pHV100 DNA with partial lacI, lacZ and luxA genes,
DEFINITION  Chimeric plasmid, mouse interferon-beta (IFN-beta) cDNA fused to
DEFINITION  Plasmid pFL260 cloning vector bla gene, encoding beta-lactamase,
DEFINITION  Plasmid pFL261 cloning vector cat gene, encoding chloramphenicol
DEFINITION  Plasmid pSI4001 triple ribosome binding site.
DEFINITION  Cloning vector M13plex18 beta-galactosidase pseudogene.
DEFINITION  Cloning vector encoding chimeric plasminogen activator K12G0S32
DEFINITION  Cloning vector pAM34.
DEFINITION  Cloning vector pCQV2 DNA.
DEFINITION  Cloning vector pEMBL+ DNA.
DEFINITION  Cloning vector pJRD17 DNA.
DEFINITION  Cloning vector pJRD178 DNA.
DEFINITION  Cloning vector pJRD187.
DEFINITION  Cloning vector pJRD179 DNA.
DEFINITION  Cloning vector M13plex07 beta-galactosidase pseudogene.
DEFINITION  Cloning vector M13plex20 beta-galactosidase pseudogene.
DEFINITION  Cloning vector M13plex19 beta-galactosidase pseudogene.
DEFINITION  Cloning vector M13plex10 beta-galactosidase pseudogene.
DEFINITION  Chimeric plasmid, mouse interferon-beta (IFN-beta) cDNA fused to
DEFINITION  Cloning vector M13plex17 beta-galactosidase pseudogene.
DEFINITION  Mammalian cell cloning vector, clone ZDD1-HYG.5.
DEFINITION  E.coli synthetic cloning vector, clone pLK54-1.
DEFINITION  E.coli synthetic cloning vector, clone pLK56-1.
DEFINITION  E.coli synthetic cloning vector, clone pLK57.
DEFINITION  E.coli synthetic cloning vector, clone pLK58.
DEFINITION  E.coli synthetic cloning vector, clone pLK59.
DEFINITION  E.coli synthetic cloning vector, clone pLK80-1.
DEFINITION  E.coli synthetic cloning vector, clone pLK84.
DEFINITION  E.coli synthetic cloning vector, clone pLK94.
DEFINITION  E.coli synthetic cloning vector, clone pLK68.
DEFINITION  E.coli synthetic cloning vector, clone pLK69.
DEFINITION  E.coli synthetic cloning vector, clone pLK69-1.
DEFINITION  E.coli synthetic cloning vector, clone pJB63.
DEFINITION  E.coli synthetic cloning vector, clone pJB65.
DEFINITION  E.coli synthetic cloning vector, clone pJB66.
DEFINITION  E.coli synthetic cloning vector, clone pLK70-191p.
DEFINITION  Plasmid cloning vector pFR109, lacZ fragment (pFR10/pSKS106).
DEFINITION  Cloning vector pFL281 beta-lactamase gene, complete cds.
DEFINITION  Mammalian cell cloning vector, clone ZDD1-HYG.3.
DEFINITION  Bacterial cloning vector pMMB190, complete genome.
DEFINITION  Plasmid pMK20 cloning vector.
DEFINITION  Plasmid cloning vector pFR98, lacZ fragment (pFR10/pSKS105).
DEFINITION  Vector MLP/moloney murine leukemia virus mutant pol polyprotein
DEFINITION  LoristB cosmid DNA cloning vector for chromosome walking.
DEFINITION  Moloney murine leukemia virus retroviral vector pLN, complete
DEFINITION  Moloney murine leukemia virus retroviral vector pLNSX, complete
DEFINITION  Mammalian cell cloning vector, clone ZDD1-HYG.2.
DEFINITION  Mammalian cell cloning vector, clone ZDD1-HYG.1.
DEFINITION  Synthetic cloning vector pRMe2ss DNA.
DEFINITION  Synthetic cloning vector pAZe3ss DNA.
DEFINITION  Cloning vector pACYC184.
DEFINITION  Cloning vector pACYC177.
DEFINITION  Cloning vector pRL126 used for promoter-detection.
DEFINITION  Synthetic expression vector TRPC11.
DEFINITION  Plasmid cloning vector pFR97, lacZ fragment (pFR10/pSKS104).
DEFINITION  Phage M13tg131 cloning vector in the 5' end of the lacZ gene.
DEFINITION  Phage M13tg130 cloning vector in the 5' end of the lacZ gene.
DEFINITION  Phage M13tg120 cloning vector in the 5' end of the lacZ gene.
DEFINITION  Phage M13tg115 cloning vector in the 5' end of the lacZ gene.
DEFINITION  Expression vector pCE30, partial sequence.
DEFINITION  Synthetic expression vector TCV.
DEFINITION  Synthetic expression vector TAC-RBS.
DEFINITION  Synthetic cloning vector plasmid pSU2719 DNA.
DEFINITION  rtificial cloning vehicle pBR327, derived from pBR322. The sequence
DEFINITION  Moloney murine leukemia virus retroviral vector pLNCX, complete
DEFINITION  Cloning vector pJRD187Kc DNA.
DEFINITION  Shuttle vector pZ189 with supressor tRNA.
DEFINITION  Cloning vector pVT102-L multiple cloning site (MCS).
DEFINITION  Cloning vector pVT100-L multiple cloning site (MCS).
DEFINITION  Cloning vector pUC4K linker and kanamycin region.
DEFINITION  Cloning vector pT7-5 with T7 promoter sequence D


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