Sequence Tag Alignment and Consensus Knowledgebase 1.0

Win Hide winhide at sanbi.ac.za
Thu Oct 9 14:29:42 EST 1997


The South African National Bioinformatics Institute announces the
availability of Sequence Tag Alignment Consensus Knowledgebase Release
1.0

The release contains processed EST  sequences obtained from recent TIGR
submissions to Genbank (this release includes the withdrawn sequences)
and dbEST distributed by NCBI. The sequences have been organised into
tissues and clustered using an algorithm specifically designed for EST
clustering and have been aligned to generate error compensated consensi.
The coverage of the consensi is designed to be as comprehensive a
representation of each available gene as possible. Alignments are also
available.

Although the full dataset can be requested, a sample EYE dataset, which
is one of 17 available from SANBI , can be downloaded from:
ftp.sanbi.ac.za/STACK

and the entire collection can be searched at:

http://ziggy.sanbi.ac.za/stack/stacksearch.htm

For further information
www.sanbi.ac.za/stack

Robert Miller, John Burke, Alan Christoffels and Win Hide
SANBI.




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