Proteome analysis database at the EBI

Margaret Biswas margt at ebi.ac.uk
Tue Jan 9 16:53:18 EST 2001


The SWISS-PROT group at EBI has developed the Proteome Analysis Database
utilising existing resources and providing
comparative analysis of the predicted protein coding sequences of the
complete genomes of bacteria, archaea and eukaryotes
(http://www.ebi.ac.uk/proteome/). The two main projects used, InterPro
and CluSTr, give a new perspective on families,
domains and sites and cover 31–67% (InterPro statistics) of the proteins
from each of the complete genomes. CluSTr covers
the three complete eukaryotic genomes and the incomplete human genome
data. The Proteome Analysis Database is
accompanied by a program that has been designed to carry out InterPro
proteome comparisons for any one proteome against
any other one or more of the proteomes in the database. 
Ref: Nucleic Acids Research, 2001, Vol. 29, No. 1 44-48


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