Dear Biothermokineticists,
I did overhear Pedro Mendes' inquiry concerning the proceedings. Recently,
Plenum Press (New York and London) sent me a sales bulletin announcing the
book "Modern Trends in Biothermokinetics" (proceedings of the Fifth
International Meeting held in Bordeaux-Bombannes, France, September 23-26,
1992, eds S. Schuster, M. Rigoulet, R. Ouhabi and J.-P. Mazat) for
January/February 1994. The ISBN no. is 0-306-44579-4. We have expected it to
appear earlier, but it's partly our fault as well (I changed position two
times during the period of edition).
Attached goes the table of contents with the final page numbers.
Greetings,
Stefan=Schuster @ rz.hu-berlin.de
***** ATTACHMENT: u:\worddoc\contword.asc *****
CONTENTS
I. Thermodynamics and Kinetics of Transport Processes and Biological Energy Transduction
1
Frontiers in the Mathematical Description of "Biothermokinetic" Phenomena
G. R. Welch 3-6
Monitoring a Heterogeneous Coupled System Using Soluble and Biologically Localized Firefly
Luciferase as a Probe for Bulk and Local ATP
C. Aflalo 7-10
Control of Cytochrome C Oxidase: Kinetic, Thermodynamic or Allosteric?
P. Nicholls 11-16
Mechanism of Bupivacaine Uncoupling in Rat Heart Mitochondria
F. Sztark, P. Schonfeld, P. Dabadie and J.-P. Mazat 17-22
Mosaic Non-Equilibrium Thermodynamics as a Tool in the Study of Oxidative
Phosphorylation
B.H. Groen, J.A. Berden and K. van Dam 23-26
The Redox State of Cytochromes as a New Tool to Assess the Thermodynamic State of
Mitochondria
S. Luvisetto, I. Schmehl, M. Canton and G. F. Azzone 27-32
Thermodynamic Response Paradigm and its Application to Oxidative Phosphorylation
B. Korzeniewski and W. Froncisz 33-38
A Model Study on the Interrelation between the Transmembrane Potential and pH Difference
across the Mitochondrial Inner Membrane
S. Schuster and J.-P. Mazat 39-44
Comparison of Retinal-Based and Chlorophyll-Based Photosynthesis: A Biothermokinetic
Description of Photochemical Reaction Centers
K.J. Hellingwerf, W. Crielaard and H.V. Westerhoff 45-52
Regulation of Energy Flux of Yeast during Steady State and Oscillatory Growth
R. Olz, K. Larsson, Ch. Larsson, E. Gnaiger and L. Gustafsson 53-60
Free-Energy Coupling Mediated by Dynamic Interactions between Membrane Proteins
R.D. Astumian, B. Robertson and M. Bier 61-66
Characterization of Energy-Dependent Phosphate Uptake by Blue-Green Alga Anacystis
nidulans: Adaptation to External Phosphate Levels Obeys a Linear Flow-Force Relation
G. Falkner, F. Wagner and R. Falkner 67-70
Brownian Dynamics Simulation of Charged Membrane Components. Implications for
their Lateral Distribution and Voltage Dependence of Ion Transport through Membranes
D. Walther, P. Kuzmin and E. Donath 71-76
Evolutionary Strategies and the Optimization of Carrier Models
J. Lenz and M. Hofer 77-81
II. Modeling of Cell Processes with Applications to Biotechnology and
Medicine 83
Mathematical Model of the Creatine Kinase Reaction Coupled to Adenine Nucleotide
Translocation and Oxidative Phosphorylation
M.K. Aliev and V.A. Saks 85-92
Critical Regulation of Multienzyme Complexes: A Kinetic Model for the Mammalian Pyruvate
Dehydrogenase Complex
B.N. Goldstein and V.A. Selivanov 93-96
The Analysis of Flux in Substrate Cycles
D.A. Fell 97-101
Estimation of Enzymatic Flux Rates from Kinetic Isotope Experiments
H.-G. Holzhutter and A. Schwendel 103-107
When Going Backwards Means Progress: On the Solution of Biochemical Inverse Problems
Using Artificial Neural Networks
D.B. Kell, Ch.L. Davey, R. Goodacre and H.M. Sauro 109-114
Quality Assessment of a Metabolic Model and Systems Analysis of Citric Acid
Production by Aspergillus niger
N. Torres, C. Regalado, A. Sorribas and M. Cascante 115-124
Steady-State Measurements and Identifiability of Regulatory Patterns in Metabolic
Studies
A. Sorribas and M. Cascante 125-131
A Biochemical "NAND" Gate and Assorted Circuits
H.M. Sauro 133-140
Dynamic Modeling of Cell, Substrate, and Product Concentrations and pH in E. coli-
Containing Agar Membranes
J. Lefebvre and J.-C. Vincent 141-147
The Interpretation of Flow Cytometry Profiles in Terms of Gene Dosage and Gene Expression
W.G. Bardsley and E.K. Kyprianou 149-153
Invention of a Useful Transcriptional Regulation System Using Mechanistic
Mathematical Modeling
W. Chen, S.-B. Lee, P. Kallio and J.E. Bailey 155-158
Tumor Progression and Catastrophe Theory
H. Daams, S. Cortassa, M. A. Aon and H.V. Westerhoff 159-166
Biochemical Neuron: Application to Neural Network Studies and Practical
Implementation of Device
M. Okamoto, Y. Maki and T. Sekiguchi 167-172
Example of the Use of Computers to Study the Variability of Seed Development of a Parasitic
Weed, Striga hermonthica (Del.) Benth. (Scrophulariaceae), after Treatment
by Herbicide
J. Pare 173-176
III. Metabolic Control Theory: New Developments and Applications 177
Responses of Metabolic Systems to Large Changes in Enzyme Activities
J.R. Small and H. Kacser 179-185
An Extension of Metabolic Control Analysis to Larger Parameter Perturbations by Inclusion of
Second-Order Effects
T. Hofer and R. Heinrich 187-192
A Control Analysis of Metabolic Regulation
J.-H.S. Hofmeyr and A. Cornish-Bowden 193-198
Regulation and Homeostasis in Metabolic Control Theory: Interplay between
Fluctuations of Variables and Parameter Changes
D. Kahn and H.V. Westerhoff 199-204
Sum of the Flux Control Coefficients: What is it Equal to in Different Systems?
B.N. Kholodenko and H.V. Westerhoff 205-210
Control Analysis of Metabolic Channeling
P. Mendes and D.B. Kell 211-216
Path Analysis in General Control Theory
G. Meszena 217-224
Phenomenological Kinetics and the Top-Down Approach to Metabolic Control Analysis
G.C. Brown 225-228
A Modular Approach to the Description of the Control of Connected Metabolic Systems
S. Schuster, D. Kahn and H.V. Westerhoff 229-235
Control Analysis of Isoenzymic Pathways: Application of Directed Graphs and
Electrical Analogs
A.K. Sen 237-242
Derivation of a General Matrix Method for the Calculation of Control Coefficients
M. Ehlde and G. Zacchi 243-252
Internal Regulation. The C.E=I=E.C Square-Matrix Method Illustrated for a Simple Case of a
Complex Pathway
A.A. van der Gugten and H.V. Westerhoff 253-262
Multiplicity of Control
H.V. Westerhoff, P.R. Jensen, A.A. van der Gugten, D. Kahn,
B.N. Kholodenko, S. Schuster, N. Oldenburg, K. van Dam
and W.C. van Heeswijk 263-268
Control of Threonine Biosynthesis in E. coli
B. Rais, R. Heinrich, M. Malgat and J.-P. Mazat 269-274
Control Coefficients in Cellular Cation Homeostasis: A Model Analysis
J. Siegenbeek van Heukelom 275-279
IV. Control and Regulation of Oxidative Phosphorylation 281
Experimental Discrimination between Proton Leak across the Mitochondrial Membrane and
Slip in the Proton Pumps of the Electron Transport Chain
M.D. Brand and Ph. Diolez 283-286
Does Redox Slip Contribute Significantly to Mitochondrial Respiration?
K.D. Garlid, C. Semrad and V. Zinchenko 287-293
Mechanistic Stoichiometry of Yeast Mitochondrial Oxidative Phosphorylation:
A Behavior of Working Engine
V. Fitton, M. Rigoulet and B. Guerin 295-299
Mitochondrial Creatine Kinase: Biothermokinetics of the Reaction and its Role in the
Regulation of Energy Fluxes in Muscle Cells in vivo
V.A. Saks, G.V. Elizarova, Yu. O. Belikova, E.V. Vasileva,
A.V. Kuznetsov, L. Petrova, N.A. Perov and F.N. Gellerich 301-312
Effect of Macromolecules on ADP-Channeling into Mitochondria
F.N. Gellerich, M. Wagner, M. Kapischke and D. Brdiczka 313-318
Control of ATP Flux in Rat Muscle Mitochondria
S. Jouaville, F. Ichas, T. Letellier, M. Malgat and J.-P. Mazat 319-325
Control of Respiration of Mitochondria from Euglena gracilis Determined by Means of
Metabolic Control Analysis: Comparison of Oxidation of Matrix- and Cytosolic NADH
A. Kesseler, S. Kisteneich and K. Brinkmann 327-332
Top Down Metabolic Control Analysis of Oxidative Phosphorylation at Different Rates in
Potato Tuber Mitochondria
A. Kesseler, Ph. Diolez, K. Brinkmann and M.D. Brand 333-338
The Influence of Phosphate on the Distribution of Flux Control among the Enzymes of
Oxidative Phosphorylation in Rat Skeletal Muscle Mitochondria
W.S. Kunz, E. Wisniewski and F.N. Gellerich 339-342
The Molecular Basis of Threshold Effects Observed in Mitochondrial Diseases
J.-P. Mazat, T. Letellier and M. Malgat 343-346
Control of Respiration in Heart Mitochondria. Comparative Study of Oxidation of Succinate
and NAD-Dependent Substrates
V. Mildaziene, V. Borutaite, Z. Katiliute, R. Petroliunaite,
L. Ivanoviene, A. Toleikis and B.N. Kholodenko 347-350
Mechanisms of the Effects of Hypothyroidism and Hyperthyroidism in Rats on
Respiration Rate in Isolated Hepatocytes
M.-E. Harper and M.D. Brand 351-356
Substrate and Calcium Dependence of the Pyridine Nucleotide and Flavine Redox State
in Rat Heart Mitochondria Respiring at Different Metabolic States
R.C. Scaduto, Jr. and A.V. Panov 357-365
V. Investigation of Cell Processes 367
Modification of Mitochondrial Metabolism by Amino Acid-Induced Cell Swelling
P. Espie, M. Rigoulet and B. Guerin 369-376
Estimation of the Mechanism of Peptide Binding to HLA Class II Molecules
E. Furuichi, N. Kamikawaji, T. Sasazuki and S. Kuhara 377-381
Shift of a Peptide Bond Equilibrium towards Synthesis Catalyzed by alpha-Chymotrypsin
B. Deschrevel and J.-C. Vincent 383-390
Modulation of Cellular Energy State and DNA Supercoiling in E. coli
P.R. Jensen, N. Oldenburg, B. Petra,
O. Michelsen and H.V. Westerhoff 391-396
Cascade Control of Ammonia Assimilation
W.C. van Heeswijk, H.V. Westerhoff and D. Kahn 397-399
Photovoltage Measurements as a Probe of Light Distribution and Ion Movements around
Photosynthetic Apparatus
G. Meszena and H.V. Westerhoff 401-406
Neural Networks Applied to Cell Signaling and Chemical Communication in Cell Networks
J.A. Prideaux, J.L. Ware, A.M. Clarke and D.C. Mikulecky 407-411
Synchronization of Glycolytic Oscillations in Intact Yeast Cells
P. Richard, B. Teusink, H.V. Westerhoff and K. van Dam 413-416
Control in Electrophysiology and Intracellular Signal Transduction
H. van Mil and J. Siegenbeek van Heukelom 417-422
Structure-Function Relationship of Magainins. Studies in Liposomal Model Systems
A. Vaz Gomes, A. de Waal, J.A. Berden and H.V. Westerhoff 423-425
The Communication between the Mitochondrial and Cytosolic Branches of Energy Metabolism
F. Laterveer, F. van Dorsten, A. van der Toorn and K. Nicolay 427-433
Calculation of Metabolic Fluxes by Mathematical Modeling of Carbon-13 Distribution
in Metabolites. I. Presentation of the Mathematical Model
R. Schuster, J.-C. Portais, F. Garderet,
M. Merle, J.-P. Mazat and P. Canioni 435-442
Calculation of Metabolic Fluxes by Mathematical Modeling of Carbon-13 Distribution
in Metabolites. II. Application to the Study of C6 Cell Metabolism
J.-C. Portais, R. Schuster, F. Garderet,
M. Merle, J.-P. Mazat and P. Canioni 443-447
VI. Computer Programs for Modeling Metabolic Systems 449
MLAB: An Advanced System for Mathematical and Statistical Modeling
G.D. Knott 451-454
SIMFIT - A Computer Package for Simulation, Curve Fitting and Statistical Analysis Using
Life Science Models
W.G. Bardsley 455-458
Optimal Design for Model Discrimination. Choosing the Best Spacing and Density of Design
Points
W.G. Bardsley and E.M. Melikhova 459-462
GEPASI: A User Oriented Metabolic Simulator
P. Mendes 463-466
Object Oriented Simulation of Metabolic Processes
H.J. Stoffers, B. van Stigt, P. Richard, A.A. van der Gugten,
H.V. Westerhoff and G.J.F. Blommestijn 467-472
MetaCon - A Computer Program for the Algebraic Evaluation of Control Coefficients
of Metabolic Networks
S. Thomas and D.A. Fell 473-478
VII. Oenological Epilogue 479
Champagne in Holland: An Experiment in Oenology
H. Daams and A. Daams-Moussault 481-483
Index 485
