IUBio

Shifted equilibrium

Pentcho Valev RUMYM at BGEARN.ACAD.BG
Thu Jan 29 03:19:56 EST 1998


Petr Kuzmic wrote:>>>>>>>>>>>>>>
Perhaps a semantic footnote might be appropriate here.  I submit that
the rate constants k+ and k- in

          k+
   A + B <==> C                 /1/
          k-

do not "change" at all merely upon adding a catalyst, which causes an
entirely different sequence of steps to occur, for example (in the case
of an enzyme following the ordered 'bi-uni' mechanism)


          k1
   A + E <==> EA                /2/
          k2

           k3
   EA + B <==> EAB              /3/
           k4

        k5
   EAB <==> EC                  /4/
        k6

       k7
   EC <==> E + C                /5/
       k8

so that the complete reaction mechanism now consists of reactions /1/ -
/5/.

The rate constants k+, k- that describe the uncatalyzed process (true to
their designation as 'constants') can change only with temperature,
pressure, or other physical factors, but not by the presence of a
catalyst.<<<<<<<<<<<<<<<<<<<<<

Of course. If k8(E) >> k- (E is the enzyme concentration), we can neglect
the uncatalyzed process but still the ratio k8(E)/k- remains crucial. Let us
try to determine the substitute for k+ for the catalyzed process: if it is
k+_catalyzed, we can reformulate the second law in kinetic terms:

     (k+_catalyzed)/(k+)  =  (k8)(E)/(k-)                        /6/

I am not sure that /6/ is unproblematic.

Best regards,
Pentcho



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