Repetitive sequence database for C. elegans

Pankaj Agarwal agarwal at ibc.wustl.edu
Wed Aug 24 14:55:10 EST 1994


A database of repetitive DNA sequence in the nematode C. elegans is
available for querying.

http://ibc.wustl.edu/rpt/elegans

The repeat elements were identified and classified using the Repeat
Pattern Toolkit. The dataset used was 3.67 million bases of almost
contiguous DNA sequence from chromosome III. 

Citation: P. Agarwal and D.J. States (1994). The Repeat Pattern
	  Toolkit (RPT): Analyzing the Structure and Evolution of the
	  C. elegans Genome: ISMB-94. (postscript copy available from 
          http://ibc.wustl.edu/rpt/elegans/paper.ps).


	  R. Wilson and others (1994). 2.2 Mb of Contiguous Nucleotide
	  Sequence from Chromosome III of C. elegans. Nature 368:32-38.

Comments and suggestions are welcome.
--
Pankaj Agarwal
Institute for Biomedical Computing
Voice: (314) 362-2134
Fax:   (314) 362-0234
email: agarwal at ibc.wustl.edu
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