recent sequences
Elizabeth Harris
chlamy at acpub.duke.edu
Fri Apr 18 13:32:53 EST 1997
New sequences appearing on GenBank since February 1:
LOCUS CRU78547 2658 bp mRNA PLN 02-FEB-1997
DEFINITION Chlamydomonas reinhardtii PF20 mRNA, complete cds.
ACCESSION U78547
NID g1813637
SOURCE Chlamydomonas reinhardtii.
LOCUS AB001037 1729 bp DNA PLN 04-MAR-1997
DEFINITION Chlamydomonas pulsatilla DNA for 18S rRNA, partial sequence.
ACCESSION AB001037
NID g1871121
KEYWORDS 18S ribosomal RNA.
SOURCE Chlamydomonas pulsatilla (strain:CCAP 11/44) vegetative cell DNA.
LOCUS AB001038 1765 bp DNA PLN 04-MAR-1997
DEFINITION Chlamydomonas pulsatilla DNA for 18S rRNA, partial sequence.
ACCESSION AB001038
NID g1871122
KEYWORDS 18S ribosomal RNA.
SOURCE Chlamydomonas pulsatilla (strain:CCAP 11/106) vegitative cell DNA.
LOCUS AB001374 1718 bp DNA PLN 05-MAR-1997
DEFINITION Chlamydomonas sp. DNA for 18S rRNA, partial sequence.
ACCESSION AB001374
NID g1854384
KEYWORDS 18S ribosomal RNA.
SOURCE Chlamydomonas sp. (strain:Antarctic 2E9) vegetative cell DNA.
LOCUS AB001483 267 bp DNA PLN 06-MAR-1997
DEFINITION Chlamydomonas pulsatilla DNA, internal transcribed spacer 1.
ACCESSION AB001483
NID g1871414
KEYWORDS ITS1; internal transcribed spacer 1.
SOURCE Chlamydomonas pulsatilla (strain:CCAP11/44) vegetative cell DNA.
LOCUS AB001484 250 bp DNA PLN 06-MAR-1997
DEFINITION Chlamydomonas pulsatilla DNA, internal transcribed spacer 1.
ACCESSION AB001484
NID g1871415
KEYWORDS internal transcribed spacer 1 (ITS1) of ribosomal RNA gene.
SOURCE Chlamydomonas pulsatilla (strain:CCAP11/106) vegetative cell DNA.
LOCUS AB001487 559 bp DNA PLN 06-MAR-1997
DEFINITION Chlamydomonas sp. DNA, internal transcribed spacer 1.
ACCESSION AB001487
NID g1871416
KEYWORDS ITS1; internal transcribed spacer 1.
SOURCE Chlamydomonas sp. (strain:Atrantic 2E9) vegetative cell DNA.
LOCUS AB001537 206 bp DNA PLN 06-MAR-1997
DEFINITION Chlamydomonas reinhardtii DNA, internal transcribed spacer 1.
ACCESSION AB001537
NID g1871434
KEYWORDS ITS1; internal transcribed spacer 1.
SOURCE Chlamydomonas reinhardtii (strain:137c, mt+) vegetative cell DNA.
LOCUS CR11586 2450 bp RNA PLN 07-MAR-1997
DEFINITION C.reinhardtii mRNA for putative mitochondrial matrix protein, MMC1.
ACCESSION Y11586
NID g1877182
KEYWORDS mmc1p gene; putative mitochondrial matrix protein.
SOURCE Chlamydomonas reinhardtii.
LOCUS AB001917 240 bp DNA PLN 19-MAR-1997
DEFINITION Chlamydomonas pulsatilla ribosomal RNA gene, intergenic transcribed
spacer 1, 5' region, partial sequence.
ACCESSION AB001917
NID g1902898
KEYWORDS intergenic transcribed spacer(ITS1) of ribosomal RNA gene, 5'
region.
SOURCE Chlamydomonas pulsatilla (strain:NIES122) vegetative cell DNA.
LOCUS AB001918 118 bp DNA PLN 19-MAR-1997
DEFINITION Chlamydomonas pulsatilla ribosomal RNA gene, intergenic transcribed
spacer 1, 3' region, partial sequence.
ACCESSION AB001918
NID g1902899
KEYWORDS intergenic transcribed spacer(ITS1) of ribosomal RNA gene, 3'
region.
SOURCE Chlamydomonas pulsatilla (strain:NIES122) vegetative cell DNA.
LOCUS CRDNA818 1019 bp DNA PLN 24-MAR-1997
DEFINITION C.reinhardtii LI818r-1 gene.
ACCESSION X95307
NID g1865770
KEYWORDS LI818r-1 gene.
SOURCE Chlamydomonas reinhardtii.
LOCUS VCVOLOPS 8752 bp DNA PLN 27-MAR-1997
DEFINITION V.carteri gene encoding volvoxopsin.
ACCESSION Y11204
NID g1914802
KEYWORDS sensory photoreceptor; volvoxopsin.
SOURCE Volvox carteri.
LOCUS VCU90320 4603 bp DNA PLN 02-APR-1997
DEFINITION Volvox carteri f. nagariensis retrotransposon Lueckenbuesser,
complete sequence.
ACCESSION U90320
NID g1916936
KEYWORDS .
SOURCE Volvox carteri f. nagariensis.
LOCUS DBU91900 1278 bp mRNA PLN 02-APR-1997
DEFINITION Dunaliella bardawil phytoene synthase mRNA, complete cds.
ACCESSION U91900
NID g1916989
KEYWORDS .
SOURCE Dunaliella bardawil.
LOCUS CRU92071 2579 bp DNA PLN 06-APR-1997
DEFINITION Chlamydomonas reinhardtii minus dominance protein (mid) gene,
complete cds.
ACCESSION U92071
NID g1928928
SOURCE Chlamydomonas reinhardtii.
The following appear to be revisions of existing GenBank entries:
LOCUS CHCIRRNL2 290 bp DNA PLN 06-FEB-1997
DEFINITION Chloroplast Chlamydomonas iyengarii rrnL gene, exon 2.
ACCESSION X68886 Z15148
NID g397090
KEYWORDS internal transcribed spacer; ribosomal RNA; ribosomal RNA large
subunit.
SOURCE Chlamydomonas iyengarii.
LOCUS CHCMRRNL3 290 bp DNA PLN 06-FEB-1997
DEFINITION Chloroplast Chlamydomonas mexicana rrnL gene, exon 3.
ACCESSION X68912 Z17231
NID g397102
KEYWORDS internal transcribed spacer; ribosomal RNA; ribosomal RNA large
subunit.
SOURCE Chlamydomonas mexicana.
LOCUS CRGIDBG 882 bp DNA PLN 12-FEB-1997
DEFINITION C.reinhardtii chloroplast chlL gene for light-indepedent
protochlorophyllide reductase.
ACCESSION X60490
NID g510965
KEYWORDS chlL gene; iron-sulfur protein; light-indepedent
protochlorophyllide reductase; protochlorophyllide reductase.
SOURCE Chlamydomonas reinhardtii.
LOCUS CRGPLP 2314 bp DNA PLN 13-FEB-1997
DEFINITION C. reinhardtii Cblp gene for a G protein beta subunit-like
polypeptide.
ACCESSION X53574
NID g18144
KEYWORDS G-protein associated.
SOURCE Chlamydomonas reinhardtii.
LOCUS CRIDA4P28 2922 bp DNA PLN 17-FEB-1997
DEFINITION C.reinhardtii ida4 gene for p28 (light chain of axonemal inner
dynein arms).
ACCESSION Z48059
NID g662905
KEYWORDS ida4 gene; p28.
SOURCE Chlamydomonas reinhardtii.
LOCUS CRMITO 12356 bp DNA PLN 17-FEB-1997
DEFINITION Mitochondrial C. reinhardtii DNA for: trnW, trnQ, and trnM genes
for tRNA-Gln, tRNA-Trp and tRNA-Met respectively;
L(1,2a,2b,3a,3b,4-8) and S(1-4) genes for ribosomal RNA;
nad(1,2,4,5,6) genes for mitochondrial NADH dehydrogenase subunits;
cox1 gene for cytochrome c oxidase subunit 1; and the rtl gene for
reverse transcriptase-like protein.
ACCESSION X54860 K02967 M22649 M25124 M25125 M25126 M25127 M25128 M25129
M25130 X04381 X13456 X14606
NID g12503
SOURCE Chlamydomonas reinhardtii.
LOCUS CRMITOLA 7968 bp DNA PLN 17-FEB-1997
DEFINITION C.reinhardtii linear 15.8kb mitochondrial genome (left arm):
NADH-Q1 complex genes nad2, nad4, nad5 and nad6 for NADH
dehydrogenase subunits, cytb gene for apocytochrome b and coxI for
cytochrome-c oxidase.
ACCESSION X66484 M37212 X01442 X16537 X62284
NID g12510
SOURCE Chlamydomonas reinhardtii.
LOCUS CRMITORA 2253 bp DNA PLN 17-FEB-1997
DEFINITION C.reinhardtii linear 15.8kb mitochondrial genome (right arm): genes
rrnS3, rrnL4, rrnS4, rrnL1, rrnL2a and rrnL2b for ribosomal RNA
subunits and trnM gene for transfer RNA-Met.
ACCESSION X66485 X62284
NID g12516
SOURCE Chlamydomonas reinhardtii.
ORGANISM Mitochondrion Chlamydomonas reinhardtii
LOCUS CRPSAF 1227 bp RNA PLN 17-FEB-1997
DEFINITION C.reinhardtii mRNA for 17 kd P21 protein of photosystem I.
ACCESSION X13495
NID g18183
KEYWORDS membrane protein; photosynthesis; photosystem I; psaF gene.
SOURCE Chlamydomonas reinhardtii.
LOCUS MICRTRNM 216 bp DNA PLN 20-FEB-1997
DEFINITION Chlamydomonas reinhardtii mitochondrial tRNA-Met gene.
ACCESSION X13658
NID g12896
KEYWORDS transfer RNA; transfer RNA-Met.
SOURCE Chlamydomonas reinhardtii.
LOCUS MICRTRNQ 228 bp DNA PLN 20-FEB-1997
DEFINITION Chlamydomonas reinhardtii mitochondrial tRNA-Gln gene.
ACCESSION X13659
NID g12897
KEYWORDS transfer RNA; transfer RNA-Gln.
SOURCE Chlamydomonas reinhardtii.
LOCUS VCPHERIII 1467 bp RNA PLN 06-MAR-1997
DEFINITION V.carteri mRNA for pherophorin III.
ACCESSION X82446
NID g563912
KEYWORDS pherophorin III gene.
SOURCE Volvox carteri.
LOCUS DAU54690 3990 bp mRNA PLN 11-MAR-1997
DEFINITION Dunaliella acidophila plasma membrane proton ATPase (dha1) mRNA,
complete cds.
ACCESSION U54690
NID g1305500
SOURCE Dunaliella acidophila.
LOCUS VCPHEROPH 1800 bp RNA PLN 07-MAR-1997
DEFINITION V.carteri mRNA for pherophorin-S.
ACCESSION Y07752
NID g1655698
KEYWORDS pherophorin-S.
SOURCE Volvox carteri.
LOCUS CRORF1995 6749 bp DNA PLN 18-MAR-1997
DEFINITION C.reinhardtii unidentified open reading frame (orf1995).
ACCESSION X92726
NID g1054719
KEYWORDS .
SOURCE Chlamydomonas reinhardtii.
LOCUS VCVOLVXN 1566 bp RNA PLN 27-MAR-1997
DEFINITION V.carteri mRNA for volvoxopsin.
ACCESSION Z69301
NID g1914804
KEYWORDS volvoxopsin.
SOURCE Volvox carteri.
LOCUS CRU41442 1286 bp mRNA PLN 04-APR-1997
DEFINITION Chlamydomonas reinhardtii ATP synthase subunit delta precursor
(CREATPD) mRNA, nuclear gene encoding chloroplast protein, complete
cds.
ACCESSION U41442
NID g1184073
SOURCE Chlamydomonas reinhardtii.
LOCUS AS1CPRBCLA 1128 bp DNA PLN 10-APR-1997
DEFINITION Astrephomene gubernaculifera chloroplast ribulose biphosphate
carboxylase (rbcL) gene, partial cds.
ACCESSION D63428
NID g1339844
KEYWORDS ribulose biphosphate carboxylase; rbcL.
SOURCE Astrephomene gubernaculifera (strain:NIES-418) chloroplast DNA.
LOCUS AS1CPRBCLB 1128 bp DNA PLN 10-APR-1997
DEFINITION Astrephomene perforata chloroplast ribulose biphosphate carboxylase
(rbcL) gene, partial cds.
ACCESSION D63429
NID g1339846
KEYWORDS ribulose biphosphate carboxylase; rbcL.
SOURCE Astrephomene perforata (strain:NIES-564) chloroplast DNA.
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