recent sequences

Elizabeth Harris chlamy at acpub.duke.edu
Fri Apr 18 13:32:53 EST 1997



New sequences appearing on GenBank since February 1:


LOCUS       CRU78547     2658 bp    mRNA            PLN       02-FEB-1997
DEFINITION  Chlamydomonas reinhardtii PF20 mRNA, complete cds.
ACCESSION   U78547
NID         g1813637
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AB001037     1729 bp    DNA             PLN       04-MAR-1997
DEFINITION  Chlamydomonas pulsatilla DNA for 18S rRNA, partial sequence.
ACCESSION   AB001037
NID         g1871121
KEYWORDS    18S ribosomal RNA.
SOURCE      Chlamydomonas pulsatilla (strain:CCAP 11/44) vegetative cell DNA.



LOCUS       AB001038     1765 bp    DNA             PLN       04-MAR-1997
DEFINITION  Chlamydomonas pulsatilla DNA for 18S rRNA, partial sequence.
ACCESSION   AB001038
NID         g1871122
KEYWORDS    18S ribosomal RNA.
SOURCE      Chlamydomonas pulsatilla (strain:CCAP 11/106) vegitative cell DNA.



LOCUS       AB001374     1718 bp    DNA             PLN       05-MAR-1997
DEFINITION  Chlamydomonas sp. DNA for 18S rRNA, partial sequence.
ACCESSION   AB001374
NID         g1854384
KEYWORDS    18S ribosomal RNA.
SOURCE      Chlamydomonas sp. (strain:Antarctic 2E9) vegetative cell DNA.



LOCUS       AB001483      267 bp    DNA             PLN       06-MAR-1997
DEFINITION  Chlamydomonas pulsatilla DNA, internal transcribed spacer 1.
ACCESSION   AB001483
NID         g1871414
KEYWORDS    ITS1; internal transcribed spacer 1.
SOURCE      Chlamydomonas pulsatilla (strain:CCAP11/44) vegetative cell DNA.



LOCUS       AB001484      250 bp    DNA             PLN       06-MAR-1997
DEFINITION  Chlamydomonas pulsatilla DNA, internal transcribed spacer 1.
ACCESSION   AB001484
NID         g1871415
KEYWORDS    internal transcribed spacer 1 (ITS1) of ribosomal RNA gene.
SOURCE      Chlamydomonas pulsatilla (strain:CCAP11/106) vegetative cell DNA.



LOCUS       AB001487      559 bp    DNA             PLN       06-MAR-1997
DEFINITION  Chlamydomonas sp. DNA, internal transcribed spacer 1.
ACCESSION   AB001487
NID         g1871416
KEYWORDS    ITS1; internal transcribed spacer 1.
SOURCE      Chlamydomonas sp. (strain:Atrantic 2E9) vegetative cell DNA.



LOCUS       AB001537      206 bp    DNA             PLN       06-MAR-1997
DEFINITION  Chlamydomonas reinhardtii DNA, internal transcribed spacer 1.
ACCESSION   AB001537
NID         g1871434
KEYWORDS    ITS1; internal transcribed spacer 1.
SOURCE      Chlamydomonas reinhardtii (strain:137c, mt+) vegetative cell DNA.



LOCUS       CR11586      2450 bp    RNA             PLN       07-MAR-1997
DEFINITION  C.reinhardtii mRNA for putative mitochondrial matrix protein, MMC1.
ACCESSION   Y11586
NID         g1877182
KEYWORDS    mmc1p gene; putative mitochondrial matrix protein.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AB001917      240 bp    DNA             PLN       19-MAR-1997
DEFINITION  Chlamydomonas pulsatilla ribosomal RNA gene, intergenic transcribed
            spacer 1, 5' region, partial sequence.
ACCESSION   AB001917
NID         g1902898
KEYWORDS    intergenic transcribed spacer(ITS1) of ribosomal RNA gene, 5'
            region.
SOURCE      Chlamydomonas pulsatilla (strain:NIES122) vegetative cell DNA.



LOCUS       AB001918      118 bp    DNA             PLN       19-MAR-1997
DEFINITION  Chlamydomonas pulsatilla ribosomal RNA gene, intergenic transcribed
            spacer 1, 3' region, partial sequence.
ACCESSION   AB001918
NID         g1902899
KEYWORDS    intergenic transcribed spacer(ITS1) of ribosomal RNA gene, 3'
            region.
SOURCE      Chlamydomonas pulsatilla (strain:NIES122) vegetative cell DNA.



LOCUS       CRDNA818     1019 bp    DNA             PLN       24-MAR-1997
DEFINITION  C.reinhardtii LI818r-1 gene.
ACCESSION   X95307
NID         g1865770
KEYWORDS    LI818r-1 gene.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       VCVOLOPS     8752 bp    DNA             PLN       27-MAR-1997
DEFINITION  V.carteri gene encoding volvoxopsin.
ACCESSION   Y11204
NID         g1914802
KEYWORDS    sensory photoreceptor; volvoxopsin.
SOURCE      Volvox carteri.



LOCUS       VCU90320     4603 bp    DNA             PLN       02-APR-1997
DEFINITION  Volvox carteri f. nagariensis retrotransposon Lueckenbuesser,
            complete sequence.
ACCESSION   U90320
NID         g1916936
KEYWORDS    .
SOURCE      Volvox carteri f. nagariensis.



LOCUS       DBU91900     1278 bp    mRNA            PLN       02-APR-1997
DEFINITION  Dunaliella bardawil phytoene synthase mRNA, complete cds.
ACCESSION   U91900
NID         g1916989
KEYWORDS    .
SOURCE      Dunaliella bardawil.



LOCUS       CRU92071     2579 bp    DNA             PLN       06-APR-1997
DEFINITION  Chlamydomonas reinhardtii minus dominance protein (mid) gene,
            complete cds.
ACCESSION   U92071
NID         g1928928
SOURCE      Chlamydomonas reinhardtii.





The following appear to be revisions of existing GenBank entries:



LOCUS       CHCIRRNL2     290 bp    DNA             PLN       06-FEB-1997
DEFINITION  Chloroplast Chlamydomonas iyengarii rrnL gene, exon 2.
ACCESSION   X68886 Z15148
NID         g397090
KEYWORDS    internal transcribed spacer; ribosomal RNA; ribosomal RNA large
            subunit.
SOURCE      Chlamydomonas iyengarii.



LOCUS       CHCMRRNL3     290 bp    DNA             PLN       06-FEB-1997
DEFINITION  Chloroplast Chlamydomonas mexicana rrnL gene, exon 3.
ACCESSION   X68912 Z17231
NID         g397102
KEYWORDS    internal transcribed spacer; ribosomal RNA; ribosomal RNA large
            subunit.
SOURCE      Chlamydomonas mexicana.



LOCUS       CRGIDBG       882 bp    DNA             PLN       12-FEB-1997
DEFINITION  C.reinhardtii chloroplast chlL gene for light-indepedent
            protochlorophyllide reductase.
ACCESSION   X60490
NID         g510965
KEYWORDS    chlL gene; iron-sulfur protein; light-indepedent
            protochlorophyllide reductase; protochlorophyllide reductase.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRGPLP       2314 bp    DNA             PLN       13-FEB-1997
DEFINITION  C. reinhardtii Cblp gene for a G protein beta subunit-like
            polypeptide.
ACCESSION   X53574
NID         g18144
KEYWORDS    G-protein associated.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRIDA4P28    2922 bp    DNA             PLN       17-FEB-1997
DEFINITION  C.reinhardtii ida4 gene for p28 (light chain of axonemal inner
            dynein arms).
ACCESSION   Z48059
NID         g662905
KEYWORDS    ida4 gene; p28.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRMITO      12356 bp    DNA             PLN       17-FEB-1997
DEFINITION  Mitochondrial C. reinhardtii DNA for: trnW, trnQ, and trnM genes
            for tRNA-Gln, tRNA-Trp and tRNA-Met respectively;
            L(1,2a,2b,3a,3b,4-8) and S(1-4) genes for ribosomal RNA;
            nad(1,2,4,5,6) genes for mitochondrial NADH dehydrogenase subunits;
            cox1 gene for cytochrome c oxidase subunit 1; and the rtl gene for
            reverse transcriptase-like protein.
ACCESSION   X54860 K02967 M22649 M25124 M25125 M25126 M25127 M25128 M25129
            M25130 X04381 X13456 X14606
NID         g12503
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRMITOLA     7968 bp    DNA             PLN       17-FEB-1997
DEFINITION  C.reinhardtii linear 15.8kb mitochondrial genome (left arm):
            NADH-Q1 complex genes nad2, nad4, nad5 and nad6 for NADH
            dehydrogenase subunits, cytb gene for apocytochrome b and coxI for
            cytochrome-c oxidase.
ACCESSION   X66484 M37212 X01442 X16537 X62284
NID         g12510
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRMITORA     2253 bp    DNA             PLN       17-FEB-1997
DEFINITION  C.reinhardtii linear 15.8kb mitochondrial genome (right arm): genes
            rrnS3, rrnL4, rrnS4, rrnL1, rrnL2a and rrnL2b for ribosomal RNA
            subunits and trnM gene for transfer RNA-Met.
ACCESSION   X66485 X62284
NID         g12516
SOURCE      Chlamydomonas reinhardtii.
  ORGANISM  Mitochondrion Chlamydomonas reinhardtii



LOCUS       CRPSAF       1227 bp    RNA             PLN       17-FEB-1997
DEFINITION  C.reinhardtii mRNA for 17 kd P21 protein of photosystem I.
ACCESSION   X13495
NID         g18183
KEYWORDS    membrane protein; photosynthesis; photosystem I; psaF gene.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       MICRTRNM      216 bp    DNA             PLN       20-FEB-1997
DEFINITION  Chlamydomonas reinhardtii mitochondrial tRNA-Met gene.
ACCESSION   X13658
NID         g12896
KEYWORDS    transfer RNA; transfer RNA-Met.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       MICRTRNQ      228 bp    DNA             PLN       20-FEB-1997
DEFINITION  Chlamydomonas reinhardtii mitochondrial tRNA-Gln gene.
ACCESSION   X13659
NID         g12897
KEYWORDS    transfer RNA; transfer RNA-Gln.
SOURCE      Chlamydomonas reinhardtii.




LOCUS       VCPHERIII    1467 bp    RNA             PLN       06-MAR-1997
DEFINITION  V.carteri mRNA for pherophorin III.
ACCESSION   X82446
NID         g563912
KEYWORDS    pherophorin III gene.
SOURCE      Volvox carteri.



LOCUS       DAU54690     3990 bp    mRNA            PLN       11-MAR-1997
DEFINITION  Dunaliella acidophila plasma membrane proton ATPase (dha1) mRNA,
            complete cds.
ACCESSION   U54690
NID         g1305500
SOURCE      Dunaliella acidophila.




LOCUS       VCPHEROPH    1800 bp    RNA             PLN       07-MAR-1997
DEFINITION  V.carteri mRNA for pherophorin-S.
ACCESSION   Y07752
NID         g1655698
KEYWORDS    pherophorin-S.
SOURCE      Volvox carteri.



LOCUS       CRORF1995    6749 bp    DNA             PLN       18-MAR-1997
DEFINITION  C.reinhardtii unidentified open reading frame (orf1995).
ACCESSION   X92726
NID         g1054719
KEYWORDS    .
SOURCE      Chlamydomonas reinhardtii.



LOCUS       VCVOLVXN     1566 bp    RNA             PLN       27-MAR-1997
DEFINITION  V.carteri mRNA for volvoxopsin.
ACCESSION   Z69301
NID         g1914804
KEYWORDS    volvoxopsin.
SOURCE      Volvox carteri.



LOCUS       CRU41442     1286 bp    mRNA            PLN       04-APR-1997
DEFINITION  Chlamydomonas reinhardtii ATP synthase subunit delta precursor
            (CREATPD) mRNA, nuclear gene encoding chloroplast protein, complete
            cds.
ACCESSION   U41442
NID         g1184073
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AS1CPRBCLA   1128 bp    DNA             PLN       10-APR-1997
DEFINITION  Astrephomene gubernaculifera chloroplast ribulose biphosphate
            carboxylase (rbcL) gene, partial cds.
ACCESSION   D63428
NID         g1339844
KEYWORDS    ribulose biphosphate carboxylase; rbcL.
SOURCE      Astrephomene gubernaculifera (strain:NIES-418) chloroplast DNA.



LOCUS       AS1CPRBCLB   1128 bp    DNA             PLN       10-APR-1997
DEFINITION  Astrephomene perforata chloroplast ribulose biphosphate carboxylase
            (rbcL) gene, partial cds.
ACCESSION   D63429
NID         g1339846
KEYWORDS    ribulose biphosphate carboxylase; rbcL.
SOURCE      Astrephomene perforata (strain:NIES-564) chloroplast DNA.






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