IUBio

recent references part 2

Elizabeth Harris chlamy at duke.edu
Tue Dec 30 15:04:37 EST 2003


Madhusudhan, R., T. Ishikawa, Y. Sawa, S. Shigeoka and H. Shibata 
(2003).  Post-transcriptional regulation of ascorbate peroxidase 
during light adaptation of Euglena gracilis.  Plant Sci. 165, 233-238.

Martinez-Rivas, J.M. and J.M. Vega (2003).  Purification and 
characterization of chloroplastic NADP-isocitrate dehydrogenase from 
Chlamydomonas reinhardtii.  Physiol. Plant. 118, 157-163.

Matsumura, K., T. Yagi and K. Yasuda (2003).  Role of timer and sizer 
in regulation of Chlamydomonas cell cycle.  Biochem. Biophys. Res. 
Commun. 306, 1042-1049.

Minoda, A., K. Sonoike, K. Okada, N. Sato and M. Tsuzuki (2003). 
Decrease in the efficiency of the electron donation to tyrosine Z of 
photosystem II in an SQDG-deficient mutant of Chlamydomonas.  FEBS 
Lett. 553, 109-112.

Misamore, M.J., S. Gupta and W.J. Snell (2003).  The Chlamydomonas 
Fus1 protein is present on the mating type plus fusion organelle and 
required for a critical membrane adhesion event during fusion with 
minus gametes.  Mol. Biol. Cell 14, 2530-2542.

Mitchell, D.R. (2003).  Reconstruction of the projection periodicity 
and surface architecture of the flagellar central pair complex.  Cell 
Motil. Cytoskeleton 55, 188-199.

Mitchell, D.R. (2003).  Orientation of the central pair complex 
during flagellar bend formation in Chlamydomonas.  Cell Motil. 
Cytoskeleton 56, 120-129.

Mittag, M. and V. Wagner (2003).  The circadian clock of the 
unicellular eukaryotic model organism Chlamydomonas reinhardtii. 
Biol. Chem. 384, 689-695.

Miyachi, S., I. Iwasaki and Y. Shiraiwa (2003).  Historical 
perspective on microalgal and cyanobacterial acclimation to low- and 
extremely high-CO2 conditions.  Photosynth Res 77, 139-153.

Miyagishima, S.Y., K. Nishida and T. Kuroiwa (2003).  An evolutionary 
puzzle: chloroplast and mitochondrial division rings.  Trends Plant 
Sci 8, 432-438.

Moestrup, O., I. Inouye and T. Hori (2003).  Ultrastructural studies 
on Cymbomonas tetramitiformis (Prasinophyceae). I. General structure, 
scale microstructure, and ontogeny.  Can. J. Bot. 81, 657-671.

Mosulen, S., M.J. Domínguez, J. Vigara, C. Vilchez, A. Guiraum and 
J.M. Vega (2003).  Metal toxicity in Chlamydomonas reinhardtii. 
Effect on sulfate and nitrate assimilation.  Biomol. Eng. 20, 199-203.

Nakamura, S., H. Aoyama and R. Van Woesik (2003).  Strict paternal 
transmission of mitochondrial DNA of Chlamydomonas species is 
explained by selection against maternal nucleoids.  Protoplasma 221, 
205-210.

Nassoury, N., M. Cappadocia and D. Morse (2003).  Plastid 
ultrastructure defines the protein import pathway in dinoflagellates. 
J. Cell Sci. 116, 2867-2874.

Nickelsen, J. (2003).  Chloroplast RNA-binding proteins.  Curr. 
Genet. 43, 392-399.

Nishii, I., S. Ogihara and D.L. Kirk (2003).  A kinesin, InvA, plays 
an essential role in Volvox morphogenesis.  Cell 113, 743-753.

Nozaki, H., N. Ohta, M. Matsuzaki, O. Misumi and T. Kuroiwa (2003). 
Phylogeny of plastids based on cladistic analysis of gene loss 
inferred from complete plastid genome sequences.  J Mol Evol 57, 
377-382.

O'Toole, E.T., T.H. Giddings, J.R. McIntosh and S.K. Dutcher (2003). 
Three-dimensional organization of basal bodies from wild-type and 
delta-tubulin deletion strains of Chlamydomonas reinhardtii.  Mol. 
Biol. Cell 14, 2999-3012.

Ohta, H., T. Suzuki, M. Ueno, A. Okumura, S. Yoshihara, J.R. Shen and 
I. Enami (2003).  Extrinsic proteins of photosystem II - An 
intermediate member of the PsbQ protein family in red algal PSII. 
Eur. J. Biochem. 270, 4156-4163.

Pagis, L.Y., L.G. Popova, I.M. Andreev and Y.V. Balnokin (2003). 
Comparative characterization of the two primary pumps, H+-ATPase and 
Na+-ATPase, in the plasma membrane of the marine alga Tetraselmis 
viridis.  Physiol. Plant. 118, 514-522.

Pan, J.M. and W.J. Snell (2003).  Kinesin II and regulated 
intraflagellar transport of Chlamydomonas aurora protein kinase.  J. 
Cell Sci. 116, 2179-2186.

Perrone, C.A., D. Tritschler, P. Taulman, R. Bower, B.K. Yoder and 
M.E. Porter (2003).  A novel dynein light intermediate chain 
colocalizes with the retrograde motor for intraflagellar transport at 
sites of axoneme assembly in Chlamydomonas and mammalian cells.  Mol. 
Biol. Cell. 14, 2041-2056.

Phadwal, K. and P.K. Singh (2003).  Isolation and characterization of 
an indigenous isolate of Dunaliella sp for beta-carotene and glycerol 
production from a hypersaline lake in India.  J. Basic Microbiol. 43, 
423-429.

Piedras, P. and M. Pineda (2003).  Manganese is essential for 
activity of allantoate amidinohydrolase from Chlamydomonas 
reinhardtii.  Plant Sci. 165, 423-428.

Polle, J.E.W., S.D. Kanakagiri and A. Melis (2003).  tla1, a DNA 
insertional transformant of the green alga Chlamydomonas reinhardtii 
with a truncated light-harvesting chlorophyll antenna size.  Planta 
217, 49-59.

Quigg, A. and J. Beardall (2003).  Protein turnover in relation to 
maintenance metabolism at low photon flux in two marine microalgae. 
Plant Cell Environ. 26, 693-703.

Raven, J.A. (2003).  Inorganic carbon concentrating mechanisms in 
relation to the biology of algae.  Photosynth Res 77, 155-171.

Rexroth, S., J.M. Meyer zu Tittingdorf, F. Krause, N.A. Dencher and 
H. Seelert (2003).  Thylakoid membrane at altered metabolic state: 
Challenging the forgotten realms of the proteome.  Electrophoresis 
24, 2814-2823.

Richter, P., A. Boernig, C. Streb, M. Ntefidou, M. Lebert and D.P. 
Haeder (2003).  Effects of increased salinity on gravitaxis in 
Euglena gracilis.  J. Plant Physiol. 160, 651-656.

Riekhof, W.R., M.E. Ruckle, T.A. Lydic, B.B. Sears and C. Benning 
(2003).  The sulfolipids 2'-O-acyl-sulfoquinovosyldiacylglycerol and 
sulfoquinovosy ldiacylglycerol are absent from a Chlamydomonas 
reinhardtii mutant deleted in SQD1.  Plant Physiol. 133, 864-874.

Rosenbaum, J. (2003).  Organelle size regulation: Length matters. 
Curr. Biol. 12, R506-R507.

Running, J.A., R.P. Burlingame and A. Berry (2003).  The pathway of 
L-ascorbic acid biosynthesis in the colourless microalga Prototheca 
moriformis.  J. Exp. Bot. 54, 1841-1849.

Rupp, G. and M.E. Porter (2003).  A subunit of the dynein regulatory 
complex in Chlamydomonas is a homologue of a growth arrest-specific 
gene product.  J. Cell Biol. 162, 47-57.

Sakato, M. and S.M. King (2003).  Calcium regulates ATP-sensitive 
microtubule binding by Chlamydomonas outer arm dynein.  J. Biol. 
Chem. 278, 43571-43579.

Salguero, A., B. De la Morena, J. Vigara, J.M. Vega, C. Vilchez and 
R. Leon (2003).  Carotenoids as protective response against oxidative 
damage in Dunaliella bardawil.  Biomol. Eng. 20, 249-253.

Sato, N., M. Aoki, Y. Maru, K. Sonoike, A. Minoda and M. Tsuzuki 
(2003).  Involvement of sulfoquinovosyl diacylglycerol in the 
structural integrity and heat-tolerance of photosystem II.  Planta 
217, 245-251.

Sato, N., M. Tsuzuki and A. Kawaguchi (2003).  Glycerolipid synthesis 
in Chlorella kessleri 11h - I. Existence of a eukaryotic pathway. 
Biochim. Biophys. Acta Mol. Cell Biol. Lipids 1633, 27-34.

Scarano, G. and E. Morelli (2003).  Properties of 
phytochelatin-coated CdS nanocrystallites formed in a marine 
phytoplanktonic alga (Phaeodactylum tricornutum, Bohlin) in response 
to Cd.  Plant Sci. 165, 803-810.

Schwarz, M., N. Sal-Man, A. Zamir and U. Pick (2003).  A 
transferrin-like protein that does not bind iron is induced by iron 
deficiency in the alga Dunaliella salina.  Biochim. Biophys. Acta 
Protein Struct. Mol. Enzymol. 1649, 190-200.

Schwarz, M., A. Zamir and U. Pick (2003).  Iron-binding properties of 
TTf, a salt-induced transferrin from the alga Dunaliella salina.  J 
Plant Nutr 26, 2081-2091.

Segovia, M., L. Haramaty, J.A. Berges and P.G. Falkowski (2003). 
Cell death in the unicellular chlorophyte Dunaliella tertiolecta. A 
hypothesis on the evolution of apoptosis in higher plants and 
metazoans.  Plant Physiol. 132, 99-105.

Semin, B.K., L.N. Davletshina, A.A. Novakova, T. Kiseleva, V.Y. 
Lanchinskaya, A.Y. Aleksandrov, N. Seifulina, I.I. Ivanov, M. Seibert 
and A.B. Rubin (2003).  Accumulation of ferrous iron in Chlamydomonas 
reinhardtii. Influence of CO2 and anaerobic induction of the 
reversible hydrogenase.  Plant Physiol. 131, 1756-1764.

Slaninova, M., B. Nagyova, E. Galova, J. Hendrychova, K. Bisova, V. 
Zachleder and D. Vlcek (2003).  The alga Chlamydomonas reinhardtii 
UVS11 gene is responsible for cell division delay and temporal 
decrease in histone H1 kinase activity caused by UV irradiation. 
Mutat. Res. DNA Repair 2, 737-750.

Spreitzer, R.J. (2003).  Role of the small subunit in 
ribulose-1,5-bisphosphate carboxylase/oxygena se.  Arch. Biochem. 
Biophys. 414, 141-149.

Steinbrenner, J. and H. Linden (2003).  Light induction of carotenoid 
biosynthesis genes in the green alga Haematococcus pluvialis: 
regulation by photosynthetic redox control.  Plant Mol. Biol. 52, 
343-356.

Sugimoto, I. and Y. Takahashi (2003).  Evidence that the PsbK 
polypeptide is associated with the photosystem II core antenna 
complex CP43.  J. Biol. Chem. 278, 45004-45010.

Sugiura, M. (2003).  History of chloroplast genomics.  Photosynth. 
Res. 76, 371-377.

Sun, M., K.X. Qian, N. Su, H.Y. Chang, J.X. Liu and G.F. Chen (2003). 
Foot-and-mouth disease virus VP1 protein fused with cholera toxin B 
subunit expressed in Chlamydomonas reinhardtii chloroplast. 
Biotechnol. Lett. 25, 1087-1092.

Tchernov, D., J. Silverman, B. Luz, L. Reinhold and A. Kaplan (2003). 
Massive light-dependent cycling of inorganic carbon between oxygenic 
photosynthetic microorganisms and their surroundings.  Photosynth Res 
77, 95-103.

Thyssen, C., M. Hermes and D. Sueltemeyer (2003).  Isolation and 
characterisation of Chlamydomonas reinhardtii mutants with an 
impaired CO2-concentrating mechanism.  Planta 217, 102-112.

Tonon, T., D. Harvey, T.R. Larson and I.A. Graham (2003). 
Identification of a very long chain polyunsaturated fatty acid 
Delta4-desaturase from the microalga Pavlova lutheri.  FEBS Lett. 
553, 440-444.

Torres, J.L.S., A. Atteia, M.G. Claros and D. Gonzalez-Halphen 
(2003).  Cytochrome f and subunit IV, two essential components of the 
photosynthetic bf complex typically encoded in the chloroplast 
genome, are nucleus-encoded in Euglena gracilis.  Biochim. Biophys. 
Acta Bio-Energetics 1604, 180-189.

Trebst, A. (2003).  Function of beta-carotene and tocopherol in 
photosystem II.  Z. Naturforsch. (C) 58, 609-620.

Tukaj, Z., K. Matusiak-Mikulin, J. Lewandowska and J. Szurkowski 
(2003).  Changes in the pigment patterns and the photosynthetic 
activity during a light-induced cell cycle of the green alga 
Scenedesmus armatus.  Plant Physiol. Biochem. 41, 337-344.

Turmel, M., C. Otis and C. Lemieux (2003).  The mitochondrial genome 
of Chara vulgaris: Insights into the mitochondrial DNA architecture 
of the last common ancestor of green algae and land plants.  Plant 
Cell 15, 1888-1903.

Ueno, R., N. Urano and M. Suzuki (2003).  Phylogeny of the 
non-photosynthetic green micro-algal genus Prototheca 
(Trebouxiophyceae, Chlorophyta) and related taxa inferred from SSU 
and LSU ribosomal DNA partial sequence data.  FEMS Microbiol. Lett. 
223, 275-280.

Van Lis, R., A. Atteia, G. Mendoza-Hernandez and D. Gonzalez-Halphen 
(2003).  Identification of novel mitochondrial protein components of 
Chlamydomonas reinhardtii. A proteomic approach.  Plant Physiol. 132, 
318-330.

Varsano, T., D. Kaftan and U. Pick (2003).  Effects of iron 
deficiency on thylakoid membrane structure and composition in the 
alga Dunaliella salina.  J Plant Nutr 26, 2197-2210.

Voigt, J. and R. Frank (2003).  14-3-3 proteins are constituents of 
the insoluble glycoprotein framework of the Chlamydomonas cell wall. 
Plant Cell 15, 1399-1413.

Wang, Q. and W.J. Snell (2003).  Flagellar adhesion between mating 
type plus and mating type minus gametes activates a flagellar 
protein-tyrosine kinase during fertilization in Chlamydomonas.  J. 
Biol. Chem. 278, 32936-32942.

Wattebled, F., J.P. Ral, D. Dauvillee, A.M. Myers, M.G. James, R. 
Schlichting, C. Giersch, S.G. Ball and C. D'Hulst (2003).  STA11, a 
Chlamydomonas reinhardtii locus required for normal starch granule 
biogenesis, encodes disproportionating enzyme. Further evidence for a 
function of alpha-1,4 glucanotransferases during starch granule 
biosynthesis in green algae.  Plant Physiol. 132, 137-145.

Wilson, K.E., M. Krol and N.P.A. Huner (2003).  Temperature-induced 
greening of Chlorella vulgaris. The role of the cellular energy 
balance and zeaxanthin-dependent nonphotochemical quenching.  Planta 
217, 616-627.

Yamaguchi, K., M.V. Beligni, S. Prieto, P.A. Haynes, W.H. McDonald, 
J.R. Yates, III and S.P. Mayfield (2003).  Proteomic characterization 
of the Chlamydomonas reinhardtii chloroplast ribosome - 
Identification of proteins unique to the 70 S ribosome.  J. Biol. 
Chem. 278, 33774-33785.

Yamamoto, Y., Y. Fujimoto, R. Arai, M. Fujie, S. Usami and T. Yamada 
(2003).  Retrotransposon-mediated restoration of Chlorella telomeres: 
accumulation of Zepp retrotransposons at termini of newly formed 
minichromosomes.  Nucleic Acids Res. 31, 4646-4653.

Yoshimura, K., Y. Matsuo and R. Kamiya (2003).  Gravitaxis in 
Chlamydomonas reinhardtii studied with novel mutants.  Plant Cell 
Physiol. 44, 1112-1118.

Yun, Y.S. and J.M. Park (2003).  Kinetic modeling of the 
light-dependent photosynthetic activity of the green microalga 
Chlorella vulgaris.  Biotechnol. Bioeng. 83, 303-311.

Zer, H. and I. Ohad (2003).  Light, redox state, thylakoid-protein 
phosphorylation and signaling gene expression.  Trends Biochem. Sci. 
28, 467-470.



-- 
Elizabeth Harris
chlamy at duke.edu


Chlamydomonas Genetics Center
http://www.biology.duke.edu/chlamy/
---





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