Recent References

Elizabeth Harris chlamy at duke.edu
Thu Feb 6 14:14:40 EST 2003


Ahn, C.Y., A.S. Chung and H.M. Oh (2002).  Diel rhythm of algal 
phosphate uptake rates in P-limited cyclostats and simulation of its 
effect on growth and competition.  J. Phycol. 38, 695-704.

Anderca, M.I., T. Furuichi, R. Pinontoan and S. Muto (2002). 
Identification of a mitochondrial nucleoside diphosphate kinase from 
the green alga Dunaliella tertiolecta.  Plant Cell Physiol. 43, 
1276-1284.

Apt, K.E., L. Zaslavkaia, J.C. Lippmeier, M. Lang, O. Kilian, R. 
Wetherbee, A.R. Grossman and P.G. Kroth (2002).  In vivo 
characterization of diatom multipartite plastid targeting signals. 
J. Cell Sci. 115, 4061-4069.

Bennoun, P. (2002).  The present model for chlororespiration. 
Photosynth. Res. 73, 273-277.

Bohne, F. and H. Linden (2002).  Regulation of carotenoid 
biosynthesis genes in response to light in Chlamydomonas reinhardtii. 
Biochim. Biophys. Acta Gene Struct. Expression 1579, 26-34.

Cepak, V., M. Zobacova and V. Zachleder (2002).  The effect of 
cadmium ions on the cell cycle of the green flagellate Chlamydomonas 
noctigama.  Archiv. Hydrobiol. Suppl. 144, 117-129.

Choquet, Y. and F.A. Wollman (2002).  Translational regulations as 
specific traits of chloroplast gene expression.  FEBS Lett. 529, 
39-42.

Coleman, A.W. (2002).  Comparison of Eudorina/Pleodorina ITS 
sequences of isolates from nature with those from experimental 
hybrids.  Amer. J. Bot. 89, 1523-1530.

Dembitsky, V.M., R. Smoum, A.A. Al-Quntar, H. Abu Ali, I. Pergament 
and M. Srebnik (2002).  Natural occurrence of boron-containing 
compounds in plants, algae and microorganisms.  Plant Sci. 163, 
931-942.

Desnitski, A.G. (2002).  Dormant stages of the green flagellate 
Volvox in a natural habitat.  Ontogenez 33, 136-138. [in Russian]

Doltchinkova, V.R. and M.D. Lambreva (2002).  Electrokinetic and 
light scattering properties of pea and Chlamydomonas reinhardtii 
thylakoid membranes: Effect of phytohemagglutinin.  Electrophoresis 
23, 2138-2143.

Dubertret, G., C. Gerard-Hirne and A. Tremolieres (2002).  Importance 
of trans-Delta3-hexadecenoic acid containing phosphatidylglycerol in 
the formation of the trimeric light-harvesting complex in 
Chlamydomonas.  Plant Physiol. Biochem. 40, 829-836.

Dutcher, S.K., N.S. Morrissette, A.M. Preble, C. Rackley and J. 
Stanga (2002).  Epsilon-tubulin is an essential component of the 
centriole.  Mol. Biol. Cell 13, 3859-3869.

Fujiki, T. and S. Taguchi (2002).  Variability in chlorophyll a 
specific absorption coefficient in marine phytoplankton as a function 
of cell size and irradiance.  J. Plankton Res. 24, 859-874.

Funes, S., E. Davidson, A. Reyes-Prieto, S. Magallon, P. Herion, M.P. 
King and D. Gonzalez-Halphen (2002).  A green algal apicoplast 
ancestor.  Science 298, 2155-2155.

Gamlieli-Bonshtein, I., E. Korin and S. Cohen (2002).  Selective 
separation of cis-trans geometrical isomers of beta-carotene via CO2 
supercritical fluid extraction.  Biotechnol. Bioeng. 80, 169-174. 
[Dunaliella bardawil]

Garcia-Mendoza, E., H.C.P. Matthijs, H. Schubert and L.R. Mur (2002). 
Non-photochemical quenching of chlorophyll fluorescence in Chlorella 
fusca acclimated to constant and dynamic light conditions. 
Photosynth. Res. 74, 303-315.

Govindjee and M.J. Seufferheld (2002).  Non-photochemical quenching 
of chlorophyll a fluorescence: early history and characterization of 
two xanthophyll-cycle mutants of Chlamydomonas reinhardtii.  Funct. 
Plant Biol. 29, 1141-1155.

Goyal, A. (2002).  Glycolate metabolism in algal chloroplasts: 
inhibition by salicylhydroxamic acid (SHAM).  Physiol. Plant. 116, 
264-270.

Gradmann, D., S. Ehlenbeck and P. Hegemann (2002).  Modeling 
light-induced currents in the eye of Chlamydomonas reinhardtii.  J. 
Membr. Biol. 189, 93-104.

Hayashi, M., H. Yanagisawa, M. Hirono and R. Kamiya (2002).  Rescue 
of a Chlamydomonas inner-arm-dynein-deficient mutant by 
electroporation-mediated delivery of recombinant p28 light chain. 
Cell Motil. Cytoskeleton 53, 273-280.

Heitzer, M. and A. Hallmann (2002).  An extracellular 
matrix-localized metalloproteinase with an exceptional QEXXH metal 
binding site prefers copper for catalytic activity.  J. Biol. Chem. 
277, 28280-28286. [Volvox]

Henley, W.J., K.M. Major and J.L. Hironaka (2002).  Response to 
salinity and heat stress in two halotolerant chlorophyte algae.  J. 
Phycol. 38, 757-766. [Dunaliella and Nannochloris]

Herbik, A., C. Boelling and T.J. Buckhout (2002).  The involvement of 
a multicopper oxidase in iron uptake by the green algae Chlamydomonas 
reinhardtii.  Plant Physiol. 130, 2039-2048.

Hollnagel, H.C., E. Pinto, D. Morse and P. Colepicolo (2002).  The 
oscillation of photosynthetic capacity in Lingulodinium polyedrum is 
not related to differences in RuBisCo, peridinin or chlorophyll a 
amounts.  Biol. Rhythm Res. 33, 443-457.

Holzinger, A., S. Monajembashi, K.O. Greulich and U. Lutz-Meindl 
(2002).  Impairment of cytoskeleton-dependent vesicle and organelle 
translocation in green algae: combined use of a microfocused infrared 
laser as microbeam and optical tweezers.  J. Microsc. 208, 77-83.

Huertas, I.E., B. Colman and G.S. Espie (2002).  Mitochondrial-driven 
bicarbonate transport supports photosynthesis in a marine microalga. 
Plant Physiol. 130, 284-291.

Invernizzi, C., J. Imhof, G. Burkard, K. Schmid and A. Boschetti 
(2002).  Effects of mutations at the two processing sites of the 
precursor for the small subunit of ribulose-bisphosphate carboxylase 
in Chlamydomonas reinhardtii.  Biochem. J. 366, 989-998.

Jeans, C., M.J. Schilstra, N. Ray, S. Husain, J. Minagawa, J.H.A. 
Nugent and D.R. Klug (2002).  Replacement of tyrosine D with 
phenylalanine affects the normal proton transfer pathways for the 
reduction of P680+ in oxygen-evolving Photosystem II particles from 
Chlamydomonas.  Biochemistry 41, 15754-15761.

Jin, E.S., B. Feth and A. Melis (2003).  A mutant of the green alga 
Dunaliella salina constitutively accumulates zeaxanthin under all 
growth conditions.  Biotechnol. Bioeng. 81, 115-124.

Kahn, M.L., C.A. Parra, C.L. Ford, F. Kaser, D. McCaskill and R.E. 
Ketchum (2002).  A mass spectrometry method for measuring 15N 
incorporation into pheophytin.  Analyt. Biochem. 307, 219-225. [C. 
reinhardtii]

Kaltz, O. and G. Bell (2002).  The ecology and genetics of fitness in 
Chlamydomonas. XII. Repeated sexual episodes increase rates of 
adaptation to novel environments.  Evolution 56, 1743-1753.

Kamiya, A. and T. Saitoh (2002).  Blue-light-control of the uptake of 
amino acids and of ammonia in Chlorella mutants.  Physiol. Plant. 
116, 248-254.

Kasai, K., S. Usami, T. Yamada, Y. Endo, K. Ochi and Y. Tozawa 
(2002).  A RelA-SpoT homolog (Cr-RSH) identified in Chlamydomonas 
reinhardtii generates stringent factor in vivo and localizes to 
chloroplasts in vitro.  Nucleic Acids Res. 30, 4985-4992.

Kim, J. and S.P. Mayfield (2002).  The active site of the 
thioredoxin-like domain of chloroplast protein disulfide isomerase, 
RB60, catalyzes the redox-regulated binding of chloroplast 
poly(A)-binding protein, RB47, to the 5' untranslated region of psbA 
mRNA.  Plant Cell Physiol. 43, 1238-1243.

Kitajima, S., M. Ueda, S. Sano, C. Miyake, T. Kohchi, K. Tomizawa, S. 
Shigeoka and A. Yokota (2002).  Stable form of ascorbate peroxidase 
from the red alga Galdieria partita similar to both chloroplastic and 
cytosolic isoforms of higher plants.  Biosci. Biotechnol. Biochem. 
66, 2367-2375.

Lavaud, J., H.J. Van Gorkom and A.L. Etienne (2002).  Photosystem II 
electron transfer cycle and chlororespiration in planktonic diatoms. 
Photosynth. Res. 74, 51-59.

Lee, S.H., T. Motomura, and T. Ichimura (2002).  Light and electron 
microscopic observations of preferential destruction of chloroplast 
and mitochondrial DNA at early male gametogenesis of the anisogamous 
green alga Derbesia tenuissima (Chlorophyta).  J. Phycol. 38, 534-542.

Lewin, R.A. (2002).  Prochlorophyta - a matter of class distinctions. 
Photosynth Res 73, 59-61.

Li, F., S.P. Holloway, J. Lee and D.L. Herrin (2002).  Nuclear genes 
that promote splicing of group I introns in the chloroplast 23S rRNA 
and psbA genes in Chlamydomonas reinhardtiii.  Plant J. 32, 467-480.

Li, G., Y. Jinag, D. Qiao, Y. Cao and C.I. Chinese (2002).  Genetic 
variability analysis of the halophilic species in Dunaliella by RAPD. 
Xibei Zhiwu Xuebao 22, 511-515. [in Chinese]

Lilly, J.W., J.E. Maul and D.B. Stern (2002).  The Chlamydomonas 
reinhardtti organellar genomes respond transcriptionally and 
post-transcriptionally to abiotic stimuli.  Plant Cell 14, 2681-2706.

Longstaff, B.J., T. Kildea, J.W. Runcie, A. Cheshire, W.C. Dennison, 
C. Hurd, T. Kana, J.A. Raven and A.W.D. Larkum (2002).  An in situ 
study of photosynthetic oxygen exchange and electron transport rate 
in the marine macroalga Ulva lactuca (Chlorophyta).  Photosynth. Res. 
74, 281-293.

Loppes, R. and M. Radoux (2002).  Two short regions of the promoter 
are essential for activation and repression of the nitrate reductase 
gene in Chlamydomonas reinhardtii.  Mol. Genet. Genomics 268, 42-48.

Marshall, W.F. (2002).  Size control in dynamic organelles.  Trends 
Cell Biol. 12, 414-419.

Matsuo, M. and J. Obokata (2002).  Dual roles of photosynthetic 
electron transport in photosystem I biogenesis: Light induction of 
mRNAs and chromatic regulation at post-mRNA level.  Plant Cell 
Physiol. 43, 1189-1197.

Maucourt, K., M. Agarwal, B. Rene and S. Fermandjian (2002).  Use of 
Chlamydomonas reinhardtii mutants for anticancer drug screening. 
Biochem. Pharmacol. 64, 1125-1131.

Maul, J.E., J.W. Lilly, L.Y. Cui, C.W. DePamphilis, W. Miller, E.H. 
Harris and D.B. Stern (2002).  The Chlamydomonas reinhardtii plastid 
chromosome: Islands of genes in a sea of repeats.  Plant Cell 14, 
2659-2679.

Mimuro, M. (2002).  Visualization of excitation energy transfer 
processes in plants and algae.  Photosynth. Res. 73, 133-138.

Morelli, E., B.H. Cruz, S. Somovigo and G. Scarano (2002). 
Speciation of cadmium - gamma-glutamyl peptides complexes in cells of 
the marine microalga Phaeodactylum tricornutum.  Plant Sci. 163, 
807-813.

Moseley, J.L., T. Allinger, S. Herzog, P. Hoerth, E. Wehinger, S. 
Merchant and M. Hippler (2002).  Adaptation to Fe-deficiency requires 
remodeling of the photosynthetic apparatus.  EMBO J. 21, 6709-6720.

Mostafa, F.I.Y. and C.S. Helling (2002).  Impact of four pesticides 
on the growth and metabolic activities of two photosynthetic algae. 
J. Environ. Sci. Health [B] 37, 417-444.

Norici, A., A. Dalsass and M. Giordano (2002).  Role of 
phosphoenolpyruvate carboxylase in anaplerosis in the green microalga 
Dunaliella salina cultured under different nitrogen regimes. 
Physiol. Plant. 116, 186-191.

Novis, P.M. (2002).  New records of snow algae for New Zealand, from 
Mt Philistine, Arthur's Pass National Park.  New Zealand J. Bot. 40, 
297-312.

Nozaki, H., K. Onishi and E. Morita (2002).  Differences in pyrenoid 
morphology are correlated with differences in the rbcL genes of 
members of the Chloromonas lineage (Volvocales, Chlorophyceae).  J. 
Mol. Evol. 55, 414-430.

Ojaimi, J., J.M. Pan, S. Santra, W.J. Snell and E.A. Schon (2002). 
An algal nucleus-encoded subunit of mitochondrial ATP synthase 
rescues a defect in the analogous human mitochondrial-encoded 
subunit.  Mol. Biol. Cell 13, 3836-3844.

Patel-King, R.S., S.E. Benashski and S.M. King (2002).  A bipartite 
Ca2+-regulated nucleoside-diphosphate kinase system within the 
Chlamydomonas flagellum - The regulatory subunit p72.  J. Biol. Chem. 
277, 34271-34279.

Pedigo, S. and R.C.J. Williams (2002).  Concentration dependence of 
variability in growth rates of microtubules.  Biophys. J. 83, 
1809-1819.

Preuss, D. and L. Mets (2002).  Plant centromere functions defined by 
tetrad analysis and artificial chromosomes.  Plant Physiol. 129, 
421-422.

Ramesh, V.M., M. Guergova-Kuras, P. Joliot and A.N. Webber (2002). 
Electron transfer from plastocyanin to the photosystem I reaction 
center in mutants with increased potential of the primary donor in 
Chlamydomonas reinhardtii.  Biochemistry 41, 14652-14658.

Ravina, C.G., C.I. Chang, G.P. Tsakraklides, J.P. McDermott, J.M. 
Vega, T. Leustek, C. Gotor and J.P. Davies (2002).  The sac mutants 
of Chlamydomonas reinhardtii reveal transcriptional and 
posttranscriptional control of cysteine biosynthesis.  Plant Physiol. 
130, 2076-2084.

Ridge, K.D. (2002).  Algal rhodopsins: Phototaxis receptors found at 
last.  Current Biol. 12, R588-R590.

Rigby, S.E.J., I.P. Muhiuddin, M.C.W. Evans, S. Purton and P. 
Heathcote (2002).  Photoaccumulation of the PsaB phyllosemiquinone in 
Photosystem I of Chlamydomonas reinhardtii.  Biochim. Biophys. Acta 
Bio-Energetics 1556, 13-20.

Rochaix, J.D. (2002).  The three genomes of Chlamydomonas. 
Photosynth. Res. 73, 285-293.

Rochaix, J.D. (2002).  Chlamydomonas, a model system for studying the 
assembly and dynamics of photosynthetic complexes.  FEBS Lett. 529, 
34-38.

Saez, M., P.A. Gomez and M.E. Gonzalez (2001).  Bioconcentration of 
linear alkylbenzene sulfonates and their degradation intermediates in 
marine algae.  J. Analyt. Chem. 371, 486-490.

Sarada, R., S. Bhattacharya, S. Bhattacharya and G.A. Ravishankar 
(2002).  A response surface approach for the production of natural 
pigment astaxanthin from green alga, Haematococcus pluvialis: Effect 
of sodium acetate, culture age, and sodium chloride.  Food 
Biotechnol. 16, 107-120.

Sarada, R., S. Bhattacharya and G.A. Ravishankar (2002). 
Optimization of culture conditions for growth of the green alga 
Haematococcus pluvialis.  World J. Microbiol. Biotechnol. 18, 517-521.

Schoppmeier, J. and K.F. Lechtreck (2002).  Localization of 
p210-related proteins in green flagellates and analysis of flagellar 
assembly in the green alga Dunaliella bioculata with monoclonal 
anti-p210.  Protoplasma 220, 29-38.

Setif, P., N. Fischer, B. Lagoutte, H. Bottin and J.D. Rochaix 
(2002).  The ferredoxin docking site of photosystem I.  Biochim. 
Biophys. Acta Bio-Energetics 1555, 204-209.

Shelly, K., P. Heraud and J. Beardall (2002).  Nitrogen limitation in 
Dunaliella tertiolecta (Chlorophyceae) leads to increased 
susceptibility to damage by ultraviolet-B radiation but also 
increased repair capacity.  J. Phycol. 38, 713-720.

Siripornadulsil, S., S. Traina, D.P.S. Verma and R.T. Sayre (2002). 
Molecular mechanisms of proline-mediated tolerance to toxic heavy 
metals in transgenic microalgae.  Plant Cell 14, 2837-2847.

Smith, E.F. (2002).  Regulation of flagellar dynein by calcium and a 
role for an axonemal calmodulin and calmodulin-dependent kinase. 
Mol. Biol. Cell 13, 3303-3313.

Smith, A.C. and S. Purton (2002).  The transcriptional apparatus of 
algal plastids.  Eur. J. Phycol. 37, 301-311.

Stanley, S.M., J.B. Ries and L.A. Hardie (2002).  Low-magnesium 
calcite produced by coralline algae in seawater of Late Cretaceous 
composition.  Proc. Natl. Acad. Sci. USA 99, 15323-15326.

Stark, K. and R. Schmitt (2002).  Genetic control of germ-soma 
differentiation in Volvox carteri.  Protist 153, 99-107.

Surpin, M., R.M. Larkin and J. Chory (2002).  Signal transduction 
between the chloroplast and the nucleus.  Plant Cell 14 Suppl., 
S327-S338.

Suzuki, Y., M. Doi and Y. Shioi (2002).  Two enzymatic reaction 
pathways in the formation of pyropheophorbide a.  Photosynth. Res. 
74, 225-233.

Svetlicic, V. and A. Hozic (2002).  Probing cell surface charge by 
scanning electrode potential.  Electrophoresis 23, 2080-2086. 
[Dunaliella tertiolecta]

Teramoto, H., A. Nakamori, J. Minagawa and T. Ono (2002). 
Light-intensity-dependent expression of Lhc gene family encoding 
light-harvesting chlorophyll-a/b proteins of photosystem II in 
Chlamydomonas reinhardtii.  Plant Physiol. 130, 325-333.

Van Hunnik, E., G. Amoroso and D. Sueltemeyer (2002).  Uptake of CO2 
and bicarbonate by intact cells and chloroplasts of Tetraedron 
minimum and Chlamydomonas noctigama.  Planta 215, 763-769.

Voigt, J. and K. Nagel (2002).  The donor side of photosystem II is 
impaired in a Cd2+-tolerant mutant strain of the unicellular green 
alga Chlamydomonas reinhardtii.  J. Plant Physiol. 159, 941-950.

Weger, H.G., J.K. Middlemiss and C.D. Petterson (2002).  Ferric 
chelate reductase activity as affected by the iron-limited growth 
rate in four species of unicellular green algae (Chlorophyta).  J. 
Phycol. 38, 513-519.

Werner, D., O. Behrsing, G. Scharte, J. Woller, M. Steup and B. 
Micheel (2002).  Monoclonal anti-diuron antibodies prevent inhibition 
of photosynthesis by diuron.  FEBS Lett. 523, 95-98.

Xia, J. and K. Gao (2002).  Effects of CO2 enrichment on 
microstructure and ultrastructure of two species of freshwater green 
algae.  Acta Bot. Sinica 44, 527-531.

Xylaender, M. and C. Hagen (2002).   'Low-waves' in chlorophyll 
fluorescence kinetics indicate deprivation of bicarbonate.  Photosyn. 
Res. 72, 255-262.

Yamaguchi, K., S. Prieto, M.V. Beligni, P.A. Haynes, W.H. McDonald, 
J.R.I. Yates and S.P. Mayfield (2002).  Proteomic characterization of 
the small subunit of Chlamydomonas reinhardtii chloroplast ribosome: 
Identification of a novel S1 domain-containing protein and unusually 
large orthologs of bacterial S2, S3, and S5.  Plant Cell 14, 
2957-2974.

Yoon, H.S., J.D. Hackett, G. Pinto and D. Bhattacharya (2002).  The 
single, ancient origin of chromist plastids.  Proc. Natl. Acad. Sci. 
USA 99, 15507-15512.

Zerges, W., S.W. Wang and J.D. Rochaix (2002).  Light activates 
binding of membrane proteins to chloroplast RNAs in Chlamydomonas 
reinhardtii.  Plant Mol. Biol. 50, 573-585.

Zhang, Z.B., R. Sapiro, D. Kapfhamer, M. Bucan, J. Bray, V. 
Chennathukuzhi, P. McNamara, A. Curtis, M. Zhang, E.J. 
Blanchette-Mackie and J.F. Strauss, III (2002).  A sperm-associated 
WD repeat protein orthologous to Chlamydomonas PF20 associates with 
Spag6, the mammalian orthologue of Chlamydomonas PF16.  Mol. Cell 
Biol. 22, 7993-8004.

Zhang, L.P. and A. Melis (2002).  Probing green algal hydrogen 
production.  Philos. Trans. R. Soc. Lond. [Biol.] 357, 1499-1507.

Zhang, X.H., R.G. Ewy, J.M. Widholm and A.R.J. Portis (2002). 
Complementation of the nuclear antisense rbcS-induced photosynthesis 
deficiency by introducing an rbcS gene into the tobacco plastid 
genome.  Plant Cell Physiol. 43, 1302-1313.



-- 
Elizabeth Harris
chlamy at duke.edu


ChlamyDB has moved to a new address:
http://www.biology.duke.edu/chlamydb/

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