IUBio

Brookheaven Files

Ethan Merritt merritt at milton.u.washington.edu
Tue Oct 8 15:30:17 EST 1991


In article <62*marco01 at UFRJVMS1> marco01 at ufrjvms1.bitnet (Joao O.M.A. Lins) writes:
>
>      Hi netters.
>
>      I'm  searching for the tertiary structure for the "horse liver alcohol
>dehydrogenase" (EC 1.1.1.1), preferibly in Brookheaven or Cambridge formats.
>Does  anybody known the sites avaiable with the Brookheaven and/or Cambridge
>files? How can I access them?
>
>| Joao Otavio M.A. Lins
>| Depto. Fisico-Quimica - IQ/UFRJ	     | E-MAIL: MARCO01 at UFRJVMS1.BITNET|

PDB at Brookhaven has a file server which will send general information
(but not, I believe, specific data files). The 1991 newsletter #55 said to
send Email to fileserv at pb1.chm.bnl.gov with a text like 
	send info marco01 at ufrjvms.bitnet

The newsletter also lists the following "on-line DATAPRTP distributors",
which may be what you want.
	
	Prophet, BBN Systems and Technologies Corp, Cambridge MA
	contact Wayne Rindone  e-mail PROPHET-HELP at BBN.COM
	
	SEQNET, Daresbury Laboratory, Warrington, UK
	contact User Interface Group e-mail UIG at DAREBURY.AC.UK
	
	Pittsburgh Supercomputing Center
	contact Hugh Nicholas e-mail NICHOLAS at CPWPCSA
	
There are others listed as well, which you can probably find by querying the
listserver.
I include below the header records for the four files which I see for this
enzyme, so that you may perhaps see which data set you wish to request 
specifically.

==> 5adh.pdb <==
HEADER    OXIDOREDUCTASE (NAD(A)-CHOH(D))         16-JAN-84   5ADH      5ADH   3
COMPND    APO-LIVER ALCOHOL DEHYDROGENASE (E.C.1.1.1.1) COMPLEX WITH    5ADH   4
COMPND   1 ADP-RIBOSE                                                   5ADH   5
SOURCE    HORSE (EQUUS $CABALLUS) LIVER                                 5ADH   6
AUTHOR    H.EKLUND,T.A.JONES                                            5ADH   7
REVDAT   3   15-JAN-87 5ADHB   1       REMARK                           5ADHB  1
REVDAT   2   04-MAR-85 5ADHA   1       REMARK                           5ADHA  1
REVDAT   1   18-JUL-84 5ADH    0                                        5ADH   8

==> 6adh.pdb <==
HEADER    OXIDOREDUCTASE (NAD(A)-CHOH(D))         16-JAN-84   6ADH      6ADH   3
COMPND    HOLO-LIVER ALCOHOL DEHYDROGENASE (E.C.1.1.1.1) COMPLEX WITH   6ADH   4
COMPND   1 NAD AND DMSO                                                 6ADH   5
SOURCE    HORSE (EQUUS $CABALLUS) LIVER                                 6ADH   6
AUTHOR    H.EKLUND                                                      6ADH   7
REVDAT   3   15-JAN-87 6ADHB   1       REMARK                           6ADHB  1
REVDAT   2   04-MAR-85 6ADHA   1       REMARK                           6ADHA  1
REVDAT   1   18-JUL-84 6ADH    0                                        6ADH   8

==> 7adh.pdb <==
HEADER    OXIDOREDUCTASE (NAD(A)-CHOH(D))         16-JAN-84   7ADH      7ADH   3
COMPND    ISONICOTINIMIDYLATED LIVER ALCOHOL DEHYDROGENASE              7ADH   4
COMPND   1 (E.C.1.1.1.1)                                                7ADH   5
SOURCE    HORSE (EQUUS $CABALLUS) LIVER                                 7ADH   6
AUTHOR    B.PLAPP,H.EKLUND                                              7ADH   7
REVDAT   3   15-JAN-87 7ADHB   1       REMARK                           7ADHB  1
REVDAT   2   04-MAR-85 7ADHA   1       REMARK SEQRES                    7ADHA  1
REVDAT   1   18-JUL-84 7ADH    0                                        7ADH   8

==> 8adh.pdb <==
HEADER    OXIDOREDUCTASE(NAD(A)-CHOH(D))          20-APR-89   8ADH      8ADH   3
COMPND    APO-LIVER ALCOHOL DEHYDROGENASE (E.C.1.1.99.8)                8ADH   4
SOURCE    HORSE (EQUUS $CABALLUS) LIVER                                 8ADH   5
AUTHOR    T.A.JONES,H.EKLUND                                            8ADH   6
REVDAT   2   15-APR-91 8ADHA   1       REMARK                           8ADHA  1
REVDAT   1   15-OCT-89 8ADH    0                                        8ADH   7
SPRSDE     15-OCT-89 8ADH      4ADH                                     8ADH   8


					Ethan A Merritt
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Dept of Biological Structure                H510 Health Sciences
University of Washington SM-20              (206)543-1421 / 543-8865
Seattle, WA 98195                           merritt at u.washington.edu
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