I would greatly appreciate any list of references that discuss the pros and
cons of various nucleotide and protein sequence alignments and comparisons.
Specifically I would like to examine which is a better method of looking for
structural similarity in protein domains: 1) DNA sequence; 2) Protein
sequence; 3) Proteinwith scoring index (ie. Dayhof); 3) DNA with modified
scoring index ; or 4) other.
Any help would be a great help!!!!
Dan
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| Daniel Enebo | dje at matt.ksu.edu |
| Division of Biology | ----------------------- |
| Kansas State University | Cell Cycle Regulation |
