Course in Informatics at Pasteur Institute

Laurent Bloch bloch at pasteur.fr
Tue Jul 9 21:11:43 EST 1996


Course in informatics offered at the Pasteur Institute.
======================================================

In the series of courses offered at the Pasteur Institute, a course
will be offered in informatics in biology. The next session will take
place from January to April 1997. The course description is attached. 
Registration is mandatory via the committee of courses. Call the 
secretary of Information and Education of the Pasteur Institute at
+33 (1) 45 68 81 40 or via E-mail at algo at pasteur.fr for further
information.
   The working language of the course is French. Tuition costs: a
nominal fee, approximately 2 500 French Francs (500 US Dollars).

Course Description
==================

Informatics in biology
----------------------

The objective of this course is to give to the researchers and future
researchers in biology, an initial exposure to informatics. Entry in
the course is reserved to those with a degree in biology or an equivalent
discipline.

With more and more tools available to the biologist, it has become important 
that the biologist acquire the ability to judge for themselves the 
usefulness of a new software by the algorithms it employs.

The accent is put on the fundamental aspect of this discipline. Two
applications in biology will be studied, the analysis of sequences 
and molecular modeling.

The theoretic aspects of informatics will be introduced: programming 
languages, programing, logic, and also in the technical domain of 
the system, the network, and computer architecture. Programming is taught
according to the functional paradigm (Scheme), but other styles 
of programming, such as algorithmic and object oriented, will be introduced.

The goal of an excellent level of theory will not hurt the acquisition of
practical knowledge which will be directly usable in the labratory.

The course will consist of lectures and practical sessions.

   Algorithms and programming		lecture			69h
   Algorithms and programming		practical (with Scheme)	52h
   Theory of Programming languages				 9h
   Object-oriented programming (with SmallTalk)			12h
   Procedural programming (with Fortran)			 6h
   The programming language C and systems programming		12h
   Introduction to Unix and X			practical	17h
   History of informatics			lecture		 6h
   Perspectives of informatics			lecture		10h
   Algorithms for Biology
	Algorithms						45h
	Examples (Sequence analysis & molecular modeling)
						practical	27h
   Installation (gcc)						10h
   Machine architecture and System planning			10h
   Logic							10h
   Networks							12h
====================================================================
Total							       307h

Course Instructors

	Laurent Bloch
	William Saurin
	Frederic Chauveau
        Harald Wertz
	Catherine Letondal
	Daniel Azuelos
	Eric Gressier
	Thierry Rose
        Louis Jones
	Guy Vaysseix
	Francoise Balmas
	Christophe Wolfhugel
	Stephane Bortzmeyer



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