SeqPup sequence editor does customized alignment pretty-prints,
allowing you to select amino base coloring. Output as PDF,
PICT, Postscript, GIF or print. See
http://iubio.bio.indiana.edu/soft/molbio/seqpup/java/
- Don
(it runs on any Java 1.1 capable system)
--
-- d.gilbert--bioinformatics--indiana-u--bloomington-in-47405
-- gilbertd at bio.indiana.edu