I am a student who study genome repeat structure in university in Japan.
I found software called REPuter, it finds repeat sequences from whole
genome.
I know RepeatMasker.but RepeatMasker uses repeat database,Repbase.
I tryed to know that REPuter can find all seaquences in Repbase.
But REPuter online is restricted to 100000bases, This is not enough for
whole genome.
I couldn't compare how good they are. And I couldn't get permission from
university to get free available
REPter software.So I can't use official REPter software.
I want to know that REPter can find all sequences in Repbase or not.
If you have knowledge of this thing ,could you teach me?
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hirobe takashi
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