PhyloGrapher is a program designed to visualize and study
evolutionary relationships within families of homologous
genes or proteins (elements). PhyloGrapher is a drawing tool
that generates custom graphs for the given set of elements.
In general, it is possible to use PhyloGrapher to visualize
any type of relations between elements.
PhyloGrapher is written in Tcl/Tk and optimized
for Linux. Also it works on Windows.
PhyloGrapher is under GNU General Public License and
freely available at:
http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html
Current version contains a graphical viewer
results of FASTA/SSEARCH:
http://www.atgc.org/PhyloGrapher/fasta_viewer_02.gif
PhyloGrapher parses results of search and represents all data
graphically what simplify the validation of given alignment.
Also, web site contains detailed information how to
generate matrix file from results of FASTA/BLAST search:
http://www.atgc.org/MatrixMining/
Feedback and comments are very welcome.
Alexander Kozik
Department of Vegetable Crops
Asmundson Hall
University California at Davis
tel: (530) 752-1742
email: akozik at atgc.org
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