removing signal peptides from protein sequence

David danova at urbanet.ch
Thu Jan 17 23:10:23 EST 2002


Bioperl has a module to detect signal peptides in proteins (called
sigcleave).
It is a good start ... http://www.bioperl.org
david

ps: good luck


"Rama" <ramat at umich.edu> wrote in message
news:fa2a520f.0201150608.575fa835 at posting.google.com...
> Hello,
>
> I am trying to cleave the protein at certain positions but want to
> remove the signal peptides. I was wondering the best way to remove
> them, before cleavage or after and if so how do I go about doing it
> from a perl script.
>
> Thank you for your help.
>





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