IUBio

Problem in compiling GlimmerM on Linux

Allen Gathman agathman at semo.edu
Fri May 23 10:29:24 EST 2003


I'm trying to train GlimmerM for a new species, and having a problem
with the makefile.  While I can compile and run GlimmerM for the
included species files (Arabidopsis, etc.), when I try to go into the
"train" directory and run "make", an error occurs:

karlin.c: in function "main" : 
karlin.c:57:
warning: return type of 'main' is not 'int'.

It appears to continue running make after that point, though. But when
I try to run trainGlimmerM, it says "command not found," so it's
apparent that the compiling hasn't completed.

Line 57 in karlin.c reads:
 void main (int argc, char * argv [] )

Anyone else experience this problem?  Or have a suggestion for solving
it?




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