UNIX (Mac OS X) and PAML

George Elkins netnews.20.elkins at spamgourmet.com
Mon Jan 19 19:09:15 EST 2004


"Vayuputra" <vayuputra369 at hotmail.com> wrote in message
news:927a6156.0311181336.30ec7520 at posting.google.com...
> I'm having trouble initiating and executing PAML in the UNIX
> environment (Mac OS 10.2).   The 'Makefile' command suggested in the
> manual doesn't seem to be executing anything.  Can anyone assist me in
> this regard?  I'd greatly appreciate the help.

Did any of the following steps, as mentioned in the PAML documentation,
work?

UNIX, linux, MAC OS X or other systems.  Save the archive on the disk.
Unpack it into a folder, say paml.
 gzip -d paml*.*.tar.gz
 cd paml/src
 cp Makefile.UNIX Makefile
 make
 ls -lF
 rm *.o
 cp baseml basemlg codeml pamp evolver yn00 chi2 ..
 cd ..
 baseml
 codeml
 evolver

George Elkins





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