[Computational-biology] Prophet - secondary structure prediction server- http://prophet.imb.ac.ru/

milch at imb.ac.ru milch at imb.ac.ru
Mon Aug 29 08:04:43 EST 2005


http://prophet.imb.ac.ru/

The Prophet secondary structure prediction server allows user to submit
a protein sequence and run prediction of secondary structure (3
classes). Physical and chemical protein properties known from sequence
are the basis of SS prediction, in that way any information about
homologous proteins does not use. Prediction method is based upon
application of stepwise discriminant analysis. You may browse and
select appropriate files containing one letter aminoacid sequence or
simply paste it in input window. The results will be redirected to
screen in a few second. For known structures you may check prediction
accuracy immediately setting input as PDB or DSSP file.



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