DNA sequence analysis via the net

NAME gmckenzie at ivory.trentu.ca
Fri Sep 29 10:52:51 EST 1995


I am a 4th yr undergrad at a small Canadian Univ with a background in Mol. Bio and Genetics. Consequently I am taking a Computer Sci course thats premise is to answer an academic que. via the "net" With my background in the above i want to take a nucleic acid sequence and do: homology, phylogeny, seq. alignment and get some inferences about secondary and tertiary structure which would enable me to have an insight about possible function. I am aware of blast, fasta, Swiss-prot and phylip. I am "green" on th
i
s as is the faculty here. I am having trouble planning a logical plan of attack in regards to which sequences of programs to utilize  i.e. order of events to reach my desired goal. I have use of Unix machines and DEC workstations for molecualr graphics like Rasmol. Any info in regards to this would be greatly appreciated.
Thanx G. McKenzie   GMcKenzie at Trentu.ca



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