pedigree analysis software

Rob Harper harper at ebi.ac.uk
Wed Feb 15 06:15:17 EST 1995


Some information about packages that might be of interest.
Info obtained from the Biocatalogue at URL http://www.ebi.ac.uk/

 PAP

AC             BC00165
NAME           PAP
DOMAIN         Pedigree Analysis Package
DESCRIPTION    The Pedigree Analysis Package (PAP) is a set of FORTRAN 77
DESCRIPTION    programs for computing likelihoods of genetic models on 
DESCRIPTION    pedigrees.
AUTHOR         -
RT             -
ADDRESS        -
CONTACT        -
SITE           ftp anonymous corona.med.utah.edu
SITE           Directory /pub/pap/unix
SITE-CONTACT   Peter Cartwright  pc at molson.med.utah.edu
OS             UNIX
LANGUAGE       FORTRAN 77
VOLUME         -

 FASTLINK

AC             BC00109
NAME           FASTLINK
DOMAIN         Genetic Linkage software
DESCRIPTION    Faster Sequential Genetic Linkage Computations
DESCRIPTION    modified versions of the general pedigree programs of LINKAGE 5.1
AUTHOR         Bob Cottingham
RA             Cottingham R.W., Idury R.M., Schaffer A.A.;
RT             "Faster Sequential Genetic Linkage Computations.";
RL             Am. J. Hum. Genet. 53: 252-63(1993).
RX             Medline; 93304419.
ADDRESS        Department of Cell Biology, Baylor College of Medicine,
ADDRESS        Houston, TX 77030, USA.
CONTACT        bwc at bcm.tmc.edu
SITE           ftp anonymous gc.bcm.tmc.edu
SITE           Directory /pub/linkage
SITE-CONTACT   bwc at bcm.tmc.edu
OS             Unix
LANGUAGE       C 
VOLUME         -

 SAGE

AC             BC00104
NAME           SAGE
DOMAIN         Epidemiology
DESCRIPTION    Statistical Analysis Package for Genetic Epidemiology
DESCRIPTION    is composed of 18 programs
DESCRIPTION    AGEON : Estimating the Distribution of Age-of-Onset
DESCRIPTION    ASSOC : marker-trait Associations in Pedigree Data
DESCRIPTION    BCROSS : Genetic Hypothesus for Quantitative Data on Inbred
DESCRIPTION    strains, their F1 and Backcross(es)
DESCRIPTION    CLUSTR : Power Transformation to Obtain Normality and
DESCRIPTION    Homoscedasticity from Clustered Data
DESCRIPTION    FCOR : Family Correlations
DESCRIPTION    FSP : Family Structure Program
DESCRIPTION    LODLINK : Lod Score Linkage Analysis
DESCRIPTION    MAPLOC : Mapping a Disease-Related Trait Relative to a
DESCRIPTION    Set of Linked markers
DESCRIPTION    MAXFUN : Function maximization Subroutine
DESCRIPTION    REGC,REGD,REGTL,REGTN : Segregation Analysis Programs
DESCRIPTION    RELATE : Relationship to Proband
DESCRIPTION    SIBPAL : Sib-Pair Linkage Analysis
DESCRIPTION    DBSORT, RENUM, SPLIT : Toolkit Programs
AUTHOR         Dr. R.C. Elston
RT             -
ADDRESS        Department of Biometry and Genetics,
ADDRESS        Louisiana State University Medical Center
ADDRESS        1901 Perdido Street, New Orleans, Louisiana 70112, USA
CONTACT        sage at haldne.biogen.lsumc.edu
SITE           -
SITE-CONTACT   -
OS             SunOS 4.1.x, Apple Macintosh II, PC 386,486 (MSDOS)




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