From jonathan.koehler from gmail.com Wed Apr 11 15:05:23 2007 From: jonathan.koehler from gmail.com (jonathan.koehler@gmail.com) Date: Wed Apr 11 17:39:50 2007 Subject: [Info-gcg] GCG: MapPlot Message-ID: <1176321923.458684.102650@l77g2000hsb.googlegroups.com> Is there a way to modify the colors that GCG outputs with MapPlot? Documentation for the feature.cols file doesn't explain how to output plots with a different color schema. ~~~~~~~~~~~~~~~~~~~~~~~ Jonathan Koehler, Ph.D. Research Coordinator Department of Microbiology and Immunology (MC 790) University of Illinois at Chicago 835 South Wolcott Avenue Chicago, IL 60612-7344 (312) 996-5763 Fax (312) 355-3581 E-mail jkoehler@uic.edu www.uic.edu/labs/lipton/ From stevet from bio.fsu.edu Tue Apr 17 09:34:09 2007 From: stevet from bio.fsu.edu (Steve Thompson) Date: Tue Apr 17 09:54:22 2007 Subject: [Info-gcg] GCG: MapPlot In-Reply-To: <1176321923.458684.102650@l77g2000hsb.googlegroups.com> References: <1176321923.458684.102650@l77g2000hsb.googlegroups.com> Message-ID: <20070417103348.P26732@epsilon.bio.fsu.edu> On Wed, 11 Apr 2007, jonathan.koehler@gmail.com wrote: > Is there a way to modify the colors that GCG outputs with MapPlot? > Documentation for the feature.cols file doesn't explain how to output > plots with a different color schema. All GCG plots can be output as Figure files and then colors can be changed within the Figure files by editing the color commands. See the Graphics section of the User's Guide for assistance. Cheers - Steve Steven M. Thompson A C T G stevet@bio.fsu.edu \-/ http://bio.fsu.edu/~stevet/cv.html /\ /--| FSU SCS / BioInfo 4U /---/ |--/ Florida State University School of \-/ Computational Science /\ /--\ 1st floor DIRAC 150G |---\ Tallahassee, Florida \---\ 32306-4120 \--| 850-644-4490 \-/ /\ 2538 Winnwood Circle /--\ Valdosta, Georgia /---| 31601-7953 |--/ 229-249-9751 From gws from ncisgi.ncifcrf.gov Fri Apr 20 08:46:45 2007 From: gws from ncisgi.ncifcrf.gov (Gary Smythers) Date: Fri Apr 20 10:06:20 2007 Subject: [Info-gcg] Announcement: GenPept 159.0 available Message-ID: <200704201346.l3KDkj5B3742430@ncisgi.ncifcrf.gov> This is to announce the availability of release 159.0 of the GenPept(R) (GenBank Gene Products) Database. GenPept is provided in a format similar to that formerly distributed by GenBank(R) under the administration of Intelligenetics Inc. This GenPept release IS _NOT_ AN OFFICIAL RELEASE FROM THE NCBI-GENBANK, but an attempt to provide a data file format compatible with existing software products. This data format is suitable as an input data file for the GCG program genbanktogcg -genpept. Compatibility with other software has not been tested. ***************************************************************************** NOTICE: Release files will no longer contain the release number in the names, so that download scripts don't have to be updated for each release. ===>> GenPept files are gzipped. ***************************************************************************** Site: ftp.ncifcrf.gov Directory: pub/genpept Files: gprel.txt.gz, gpdat.seq.gz Directory: pub/genpept/divisions Files: 1 file for each GenBank file Directory: pub/genpept/updates (daily, cumulative) Files: gpseq_updates.dat.gz Rel. Date: 19-Apr-2007 If you have questions or comments concerning this data, or you experience any difficulty in downloading the data via ftp, please contact: Gary Smythers gws@ncifcrf.gov 301-846-5778 or Bob Stephens bobs@ncifcrf.gov 301-846-5787 # ----------------------------------------------------------------- # | Gary W. Smythers [Contractor] | email: gws@ncifcrf.gov | # | Programmer Analyst IV | | # | Advanced Biomedical Computing Center | Phone: (301) 846-5778 | # | SAIC NCI-Frederick | FAX: (301) 846-5762 | # | PO Box B, Bldg 430 | | # | Frederick, MD 21702-1201 USA | | # ----------------------------------------------------------------- =============================================================================== GenPept (R) and GenBank (R) are registered trademarks of the U.S. Department of Health and Human Services for the GenBank Gene Products and the GenBank Genetic Sequence Data Banks. ----------------------------------------------------------------- | Gary W. Smythers [Contractor] | email: gws@ncifcrf.gov | | Programmer Analyst IV | | | Advanced Biomedical Computing Center | Phone: (301) 846-5778 | | SAIC NCI-Frederick | FAX: (301) 846-5762 | | PO Box B, Bldg 430 | | | Frederick, MD 21702-1201 USA | | -----------------------------------------------------------------