MMP releases new SSR data

Mary Polacco maryp at teosinte.agron.missouri.edu
Mon Oct 16 09:38:45 EST 2000


The Missouri Maize Project has released to MaizeDB over 200 newly
mapped SSRs and updated, more precise positions. Details are
on the MaizeDB server,
      http://www.agron.missouri.edu/ssr.html

Cheers,
mary,
Curator MaizeDB

Attached: Newly Mapped SSR and Updated SSR.

1. 217 NEWLY MAPPED SSR



              Bins                  GenBank               PrimerF 
PrimerR
  ----------  --------------------  -------------------- 
------------------------------  ------------------------------
  umc1948      1.01                 BE238625 
TGTTGAAATAATGGAACACCTCCC        ATCTATCTGGTTTCACGATCTCGC
  umc1977      1.01                 BE050729 
GAAGAGTCGCTCTCCTGCGTC           TGGAACTTGTTAAAAGGTGCGG
  umc2012      1.01 
CTTGCATTGAACGACGACCTG           CGTACGCTTGCAATGCTTCTCT
  umc1976      1.02                 BE050768 
TGCCGAGGCTTCTAGTAGACCAA         CGCTATATCTATCCCGCAGCAAC
  umc1880      1.03 
CGCATCCGCCTAGCTCTATACTAA        GCATCGAACAGCTGAGATTGTAGA
  umc1849      1.04 
TCCTTGTTGAAGATTTTATTTCTGCT      GGCTTTAAGTGATGCTCAAACGTA
  umc1917      1.04 
ACTTCCACTTCACCAGCCTTTTC         GGAAAGAAGAGCCGCTTGGT
  umc1903      1.05 
AAAACTTCTCATGCCCGGAATAAT        GCTTGACGACCATCACAAATCTTA
  umc1906      1.05 
ACCTTTGCTGCTGCTACTGTGTC         CTAAAGAGGAATCGGTGAAGGTCC
  umc1812      1.05- 1.06           AW520058 
TACAAGGAAGGCAAGTTCATCCTC        ATGCAGGTGACATTCATCATCATC
  umc1972      1.05- 1.06           BE051243 
ATAGCTCGAGTATTGCGTTGCTCT        AGTTGTTGGTGATGGTGAAGGTG
  umc1811      1.06                 AW438279 
AGATAGCCGCCGAGACCAAG            ACTCACTCGACGGACTTCTCGAC
  umc1919      1.06 
TAAATCTGAGCCAGTCATAAGGGC        AGCAGAATAAAGTACGGTAGAGGTGG
  umc1924      1.06 
GGATGCGGTCGTACAGTACAAGTAT       CTACAACAACTGCTGCTCCCG
  umc1925      1.06 
CCTCCGGGTTGTCATACTGTAAAA        GATGGTTGTGATTAGTAGCGCAGA
  umc1988      1.06                 BE025465 
CAGGTGGTACGCCATGAACC            GATGCTCAAGGAGCAGCGAC
  umc1833      1.07- 1.08 
TTACATGTACCCACATCCTTGCAG        CAGGGATCTGGGAGTATCCTCTTT
  umc1838      1.08 
CTTCACGAAGGTCTGAAACTTAGG        GTGCATAAATAAAAGGGGGAGAGT
  umc1843      1.08 
GTCACATGCACTGCTGTCCTCTAT        CTTATGTCATTCTCTACTCGCGCA
  umc1848      1.08 
TCAGCTTTATCTCTACCCATTGCTTT      TCCATCATCTCCCTCCAGACTTTA
  umc1928      1.08 
CACACTCACAGTTTCACACTGCAT        GAATCTCGTACAGTGGTGATGTGG
  umc1955      1.08                 BE186169 
GCCAAGGTGGGTCTGGCTAT            ACCACCTTGTCCGTATCCTTCAC
  umc1981      1.08                 BE050403 
CGGCAGAGAACAAATCCAGG            CCCCACCATTCAGCTGTCTC
  umc1991      1.08                 AW927818 
GAAATTGATGCAATTCACCCTGAT        ATTGAATTGCGTGATGCAAGAGTA
  umc1998      1.08 
GCCTCCCAAGTGCAATATTAAATAGA      AGAGCACAAGAACCACAACAACAA
  umc1914      1.08- 1.09 
CAACATGAGCGTGCTAAATACTCG        ACAGGAACACATGAGGTCATCAAA
  umc1885      1.10 
TATACCAGCATCAGGTCTCGTCG         GTAGAGTGACCGTGCTGTAGCAGA
  umc1862      1.11 
ATGGGCACATGAAAAAGAGACATT        CCCATGAGAAGAGTGAAGACAACA
  umc1817      2.00- 2.02           AW400071 
CTACGCAGGCTTCAACCACC            GTACTGGTGATGATGGTACCCCTG
  umc1823      2.02 
AAAGCCTTACTGTTATTAGGCTAGGCA     AGAAAACCAGCCCCAGATGTTC
  umc1934      2.02 
TCCGGGACTAGTTGCTTGGTAGTA        TAGTGGTATCGTGATTCATGGGC
  umc1961      2.02                 BE128784 
GGATGAGAATTGAGAAAGAGCCAA        CATGTCCATACACAGTCATACACTGC
  umc1980      2.02                 BE050429 
CCTAGCATTTACGCGGAGGAG           CTGGTCCGAGGTCTCGTCTTC
  umc1845      2.03 
TGGTTGAACTGTTAAATCTGTCCTGA      TGGTAACCAGATTCCCACAGATG
  umc1769      2.04                 AW330654 
GACGCGACTTATTCAGCACCAC          GTCTTGATGTGCTTCAGCTCCTTG
  umc1861      2.04 
CAAAAGGTTTTGAATTAAAATATCCGA     CAAAGGCAAGAACTCTAGCATGAA
  umc1581      2.05                 AW055984 
GGCACGAGATTTGAAACAGTTAAGA       ACTCCATTACCTTTGTCTTGGCAG
  umc1884      2.05 
TAGGAGCAGTATGAGAGGGCACTT        CTTTTTCTAGCGATCATTCTCCCA
  umc1922      2.05 
CTTTTCCGCTGCTCTTCCTTTT          TTCCCTTGTTCCAGATCCTCAATA
  umc2007      2.05 
GTGCATATGCGCACGGAAGT            AGTAGTTACACAACGCAACACGAGG
  umc1923      2.05- 2.06 
GTGATGGAAGAAGGGCTACAGATT        GGTATAGTATGGTCCGACACGGTT
  umc1755      2.06                 AW453203 
CTCCTCGGCATCCTACGAGATAC         GTGCTCGTGCTCGTGGCTAT
  umc1875      2.06 
AAGCGACAGTTGGTTTCAGTTTTC        AGTTGCATGACCTTGTCAACCTTT
  umc1890      2.07 
TGAAGGGCCTCCAAGTTAATCTAAA       GCTAATGTGGAACTGGAAGAACGA
  umc1946      2.07 
GAAACGACCAGCACAGCACAT           GCACCACACCATCAGATCCAG
  umc1947      2.08 
GGATCTCACCCCCTGCTGTC            ATCACGCGCTCACTCTCCTCT
  umc1992      2.08                 AW927531 
TGTACGACTTCTTCTGGACGCAC         TAGATGTCGATGTCCTCCAGGG
  umc2005      2.08 
GTAGAAGATCAAGCAGGAGCGATG        GGTAACCGTGTTTCGGAATCTGTA
  umc1931      3.00 
TAGCCTGAGTCGTTACAATGTGCT        TAGGTCCACAAAATAAACAGGCAG
  umc1892      3.01 
AGCTGCAAAAGCAAGTGAAACAAT        TCTCCTCGATCGTTGTATGTGTGT
  umc1970      3.01                 BE051700 
ACTGATGGTGTTCTTGGGTGTTTT        TTTTTACCCGAAGGTTCATCGTTT
  umc1814      3.02                 AW438378 
AGAAGAAGAGGAGGTTCCATGACC        GCATGTTTCCCTTTCACCTCC
  umc1886      3.02 
GTTTGACAGCACAAGTGCAAGAAA        GAGGTGGACATTGGACAACACC
  umc1810      3.04 
TCTCCACGACGATTAAAAGGCTAA        AGCAGTAGCAAGAGGGATAGAGCA
  umc1835      3.04 
CCCCCTAACATCACGAAGACG           CTGTTCTCTTTGTGTATGCGTTCG
  umc1900      3.04 
AGAAAAACAACACAACCACGGAAC        GTTTTTCTTTCGCTTCTTTCTCCC
  umc1908      3.04 
CGTACACTCAATCACGATCCAAAC        AACTTTGGGTACAAGTCAAGAGGC
  umc1920      3.04 
GGTTCGGGTTTGCTACGTGTT           ACGAGACAACACAACCAAGACAAA
  umc1965      3.04                 BE056000 
GGTGAGGAGGATGATGAAATTGAG        GCTACCTCGAACTCAGCAATGAAT
  umc1968      3.04                 BE051808 
CTTCCCCTCCGCTACTGCTC            GTACTTGGTGTTGTCGCTCTTCTTC
  umc2000      3.04 
CTGTTGTCAAGCCAAGCCAGT           AGGCTTGTGAGACTCAGCAGTTTT
  umc2002      3.04 
TGACCTCAACTCAGAATGCTGTTG        CACAAAATCCTCGAGTTCTTGATTG
  umc1839      3.05 
TACAAGAGTGAGAAGCCCGATCAT        AGTCCCACTCCCAGCAAACAT
  umc1874      3.05 
TTGTTTGAAGTGTTCCCTGTATGC        TATACTCATGCCCATACCCGTTG
  umc1907      3.05 
AACATGACAAAATGAGCTTCAAATTC      TCGGTAGTGGTATCCCTAGGATGT
  umc1954      3.05                 BE186517 
CAAATGTCACGAACTTCTCTCCCT        TTCTGGTGAACATGGTCATTATGG
  umc1973      3.05                 BE051060 
CAGGCAGAAAAGGAACGGAAC           GTGCGAGAGAAGATGGATGATTG
  umc1876      3.06 
CGACTTCAAACTAAAACCTTGTCACC      TACGAATTTTAATTTGGGACGGAG
  umc1949      3.06                 BE238520 
TGTAAACAGGTTGATCGTTGGAGA        TGTTTTGATCGCTTCACGCA
  umc1951      3.06                 BE225260 
TTCCAGCACACACTAGACAACACA        CTCAAGGTCATCTTCTGCCCCTA
  umc1985      3.06                 BE050134 
CCTTGTGTCTTTCCTCTGTCCTGT        AGAGGAAGACCGGGGAAGAAG
  umc1825      3.07- 3.08 
ACTCAAGAGCAGACTGCAAAACCT        CGTGCATGTATTGTTTGTCCTAGC
  umc1844      3.08 
GGCATGGGTCTCTCATAAAGTCAT        CGACGTATATGGCTGAGAACCCTA
  umc1915      3.08 
AGACGAGTTAAACCTCCATCATGC        CCTACCCCAACTTGCTTGAGACTA
  umc1813      3.09                 AW519917 
CTGTACATGGATATGGCATTGGTG        GCATATACACCACCTTGGACAACA
  umc1909      3.09 
AGCTGGATCTCCTTTGGCTTTATC        ATCAGTCAAATCCACCTGCGTAAT
  umc2008      3.09 
GTGGACTACTCTCGCTTCGCTTT         CGTGGACGTACTCGATTAGTTTGTT
  umc1855      4.01 
CTCCGGGCAGGTCCTACTACAT          GATGAAGGAAAGAAGACACCATCG
  umc1902      4.03 
CCTCATCTCTCATGGGATGGATA         TTCAGCATGACATATCATACAGTAGCA
  umc1926      4.03 
ATGCCAGCATTCTTCATCCTACAT        TGAGGCTTGGTCCACTAAAGAAAG
  umc1821      4.04                 AW287802 
CAGACCATCTCTCACTCGCAAAT         TTTTCCCCCGTTATTAGTAGCGAT
  umc1953      4.04                 BE186707 
AAGCAGAAGCGAGACACTAACACA        GATCGATCGACGATTATGGATCTC
  umc1963      4.04                 BE057013 
CTCGTTCGAGGGGATGTACAAG          CTTGCACTGGCACAGAGACG
  umc1964      4.04                 BE056946 
CTTCTCACTGTCGCAGAACAAGAG        CCGTATGTGTGTACTGTGGATTCAT
  umc1969      4.04                 BE051731 
CTCGAGCCCAGCAGAGAAAG            GGTGGAGCCCATGGCTATTACTAT
  umc1851      4.05 
TATCTATATCTTCCCACCCCTCCT        GAGAGAAGAACGGTGGCTACG
  umc1891      4.05 
TGTGCACGCCTACTATCTTTTGAG        GGACAGCTGCGTATCTTTGTATCA
  umc1895      4.05 
GGCGTGGATAAAAAGTAATTGTGC        TTATTCAAGTCATTTCGTGCGCTA
  umc1896      4.05 
CCAGGTATATGTTCTTTCCCCTCC        ACGTCTCACTTATGATCCCTTGCT
  umc1945      4.05- 4.06 
GCGTACTGCTGGTGGTGATG            TGGGACCCCTAACTACTACGGC
  umc1869      4.06 
CGAGCGCTCTAGACACGATTTT          GAACTGGAGGAGCGAGCATGTAT
  umc1847      4.07 
GCCCAAGGTAGATTTTTACTCTCCA       AAGTCGTAGAGCTCGTCGTGATG
  umc1994      4.07                 AW927400 
AGCGCTGTGTTTTACTTCCCTTC         CAAGTACTACCTGGACGACACGG
  umc2009      4.07 
CACTTCAAGGCTGTGTCATTGTG         CCTCTCCGGATCAGAACAAGAAG
  umc1834      4.08 
AAGATAATGCAACCCTGGACAAAA        TTGCGGATCTGTTAAGGTGACATA
  umc1842      4.08 
CCACCTGCACAACACACATAAAAC        GTGGTGGAGTCGCTAAGTCAGGT
  umc1856      4.08 
CATGCCTTTATTCTCACACAAACG        AGATCTGTTTTGCTTTGCTCTGCT
  umc1871      4.08 
CATGCAAGCTTATCCTCCTCACTT        CTCTTTTCCTGCCTGCTAGAGATG
  umc1899      4.08 
GAAACTAATCAGTGCGCCACAGTA        TGCATACAGGTTACAGCAGGACTC
  umc1940      4.08- 4.09 
AACAACAAATGGGATCTCCGTTAC        CCATCTGCTGAGGGCTTATCTG
  umc1999      4.08- 4.09 
GTCCCATCTGCTGAGGGCTTAT          ACAACAAATGGGATCTCCGTTACA
  umc1820      4.09                 AW324703 
GATCTGGATGCTTGCTTGAGAGTC        GCTAGCTACTCTCGATCAGGGGAA
  umc1939      4.09 
CAAATACACCTCCAGCATCAGTTG        GATCCCATTTGTTGTTGCTGCT
  umc1989      4.09                 BE025301 
CTTGCGGTTGCCTAATTATGTGAT        GATTACAGACACAAAACCCCCTTG
  umc2011      4.10 
ACATGTGCTGCAGTCATTAGGAAA        AAATCACATGGTTTTTCAGGTGCT
  umc1716      4.11                 AW566135 
ACCACCAGCTACCAGGGATGT           CTGCTGGATCTGCTCGTACTTGT
  umc1496      5.00                 AW225123 
GATTACAACCCACCGGAGTTACAG        GCTCTTCCTAGGTGCAGACAAAGA
  umc1901      5.00 
CCTATAATAAGTTCACGCAAGTGGC       AAGTACCATTGCACATTTCTGGTG
  umc1894      5.02 
TTTCTCATGACATTGCAAGCATCT        TATGCAAAAGGTGAGCCTGCTTAT
  umc1815      5.03                 AW424827 
ACATACAGGTCACAACTCACAGCG        GCTGCCTTCTTCCTTCTCTTCTCT
  umc1830      5.03 
CCTATAATGTCTTAATGTGTCAGACCAG    TCCTCCTGTCATGAATCAATTTCT
  umc1850      5.03 
ACACATAAAAATGCTCGTTTTGGG        GTGCTGTCGTCTGATGAGGAACTA
  umc1852      5.03 
CTGTTTGCTATCTCCAAGTCTGCAT       TTGCATGTAGTCACCTCGATGTTC
  umc1870      5.03 
AAGATTACGTTTAGCCCGTTCGTT        GAATTCGGATTGGAATGTTGTTTC
  umc1935      5.03 
TGTGCTGTGTGTAATATGGTCGTG        TAATCAGGAGGAGAATTCGGTCAA
  umc1860      5.04 
TTTACAATGCGCTATCCCTAGCTT        ATGTTTGCCTACTAAAAGCCGACA
  umc1937      5.04 
GAAGGCCCAGAAAACTGGAATATG        GCCTGACGATCCTGACAGTTTTT
  umc1966      5.04                 BE055973 
GTTTTCGACGAGGGGACTACATTT        CACGGTTGAGAACTTCGCTTGTAG
  umc1975      5.04                 BE050839 
GAGGAGGTGGAGTTTTCCGTCT          CTACCACCGTAGCTGCGACC
  umc1990      5.04                 AW928069 
CATTTTCTGTGCTCAAATGGCTTC        CAGGCTGGACATTGCTCTCTAGTT
  umc1822      5.05 
GGTATAATTTTGCAAGCAGAAAGGG       GGTTTGCTCAGGAAGAGCATGT
  umc1853      5.05 
TTATTATTAACACCTGCCTGCGCT        GCTAGCTAGGAAACATGGCTTGTC
  umc1941      5.06 
ACGACGAGACTCTGTTCTGGTTCT        AGGAGGATTACGTCAATCTGTTCG
  umc1375      5.07- 5.08           AI881341 
AGTTCGACTTCGACCCGGAC            GTCAGGCTTCTTCTCGACACACC
  umc2013      5.07- 5.08 
GGGACGAGAGTCTGTTGTTGTTG         GTTGATGCATGTGACTCTGGAAAC
  umc1829      5.08- 5.09 
GTTGATTGGTTGATGTGGAAACAA        CAGTTTGATGTTCATGGCTCTCTC
  umc2010      6.00- 6.01 
AATCTGGCAAACCCCCATAGAC          GTCCTATCCACGGGTTCGTCTC
  umc1883      6.01 
GAATAATCAATCCATCGATCTCGC        AACTGCTGTGGATGAAAGAGGAAG
  umc1996      6.01                 AW787579 
CTCGTCGTGTTAGTCGTGAAGC          CAGAAGCTCATACGGGTTCTCCT
  umc1832      6.01- 6.02 
GATGCTCGAATTTGTGATGAATGA        TGTGTACCAAACTTCATGGTGGTC
  umc1818      6.02                 AF148498 
TCGGTCGAGGCATAACTAGCTC          CAGCTTCTTCCACTTCTTCAGCA
  umc1887      6.03 
CTTGCCATTTTAATTTGGACGTTT        CGAAGTTGCCCAAATAGCTACAGT
  umc1918      6.03 
CACAAGAACATTATGACGACCGAG        AAGCAGGAGACATCGTTTAAGTCG
  umc1857      6.04 
TTCCTTGCCAACAAATACAAGGAT        GTTCATTGCTTCATCTTGGAACCT
  umc1979      6.04                 BE050641 
AATTTCGGGAAACAGGCCAT            GAGTCCCCGAAACTGAACACC
  umc2006      6.04 
AGTCCATCACCATCCCTGGC            GCAGAACTATTGTCAGTTAACCTTGCA
  umc1826      6.05 
CTGGCTTAGGAGAACTTCCTCATT        TGATAATCTTGATGATCTCGGTGG
  umc1859      6.05 
ATATACATGTGAGCTGGTTGCCCT        GCATGCTATTACCAATCTCCAGGT
  umc1912      6.05- 6.06 
ACGAAGGTAGTCCATCAACTGCAC        GACGGGGGCTGTAGGTTCTG
  umc1897      6.07 
ACCGGAACAAAGGAAAAAGAAAAG        GAGAGCTTACGTTGTGTGGATGAA
  umc1840      7.00 
CTGTTGCATGCATTATAGACAGGG        GGAGAGAGCAGAGCACAAGAAAAC
  umc1632      7.01 
GGACACTTCCTTCCACGAAAAA          CGCAGATGGATGAATAACCTCTTC
  umc1927      7.01- 7.02 
AAGACAAATGGTTCTCTTCTATTGTTG     CGCCTAAAAAGCAAATGAGAGTTA
  umc1932      7.01- 7.02 
ACTTGCGCATATAAGTCGGGATG         AGGATTAACGATGAGGAGCCTCTG
  umc1713      7.02                 AW573395 
GGCTTTCTTGTTCTCACTCCTTGA        GTTCTTAGCCTCATGGAATTCTGC
  umc1831      7.02 
TTTCGACTGCTAGTGTACTTGGGG        CTCTACATCTTCAGCGTCTCCACA
  umc1879      7.02 
TTTCTGATTAGCTAGAAGCGCGAG        GATAAAACAGTACTGGGCCGATTG
  umc1881      7.02 
TATACACTACTCAAGCTGCGCGTC        GGCACTCAATCTCGGTGAACAT
  umc1929      7.02 
TCCAAGCATTATGCATCACAAACT        GCATGAATTCAACACAGAACCACT
  umc1978      7.02                 BE050712 
CACTCCCTCCATTTCTCTCACCT         ATCGCTACCATTGGACGCTTTAC
  umc1983      7.02                 BE050246 
ATGGATCAGGGGAAAGAGCAAG          CTGAAGGCCTCCTCGTCCTC
  umc1986      7.02                 BE050115 
CTACTTACGAACGGAAACGCCC          ACGAGACGGTCGACAAGGAAG
  umc1642      7.03 
CACTACAGCGCCTGTAACTGCC          CATGAGCTAAGCAAGAGGGGTATG
  umc1672      7.03 
CTTTGTTCCAGATCCATCTTTTCG        CCTAGACCCCACTCATGTGGTAAC
  umc1694      7.03 
ATCATTCTGCAGGTCACGAGAAG         AGAGACGAAAACCGACCATTCAT
  umc1837      7.03 
AAGTGTTGGGAAAGAAGGGGACT         TGGTCGGGGCTTCCTATAGTTAAA
  umc1841      7.03 
CTGCATGATTCTCCTGAACACG          ATGATGCACCCGCAGCTACTAC
  umc1865      7.03 
GAGGAGTTAGGGTCCGTCCATAC         CTCTTCCTCTCCGTCTCGCTC
  umc1987      7.03                 BE050079 
ACCCTCCGAAAAGCAAGCTC            CGTGGGCTCCTCCTTCTTGT
  umc1888      7.03- 7.04 
TCCAAAAATGTTTCTGCTGAATGT        TGCTTGAAAAATCTTGATCAGCTC
  umc1944      7.03- 7.04 
GAAGAAGGATCGCACACATGG           AGACTGTCGCGCTGTACTATACCC
  umc2001      7.03- 7.04 
TGAAGAAGGATCCGCACACAT           AGACTGTCGCGCTGTACTATACCC
  umc1936      7.04 
GAGCTCATGTGTATGTGGACGTTG        AATAAACAGAGGTAGGTCAGGTCGC
  umc1760      7.06                 AW360581 
CATGTGGGTGTTAATAAGCAAGGG        GCCTTGTTTGCTCTCTGAAACAAT
  umc1872      8.02 
CTTTTGTGATGTCTGCAATATGCC        TTAGTAGGTGCATTGGATGCTCAA
  umc1913      8.02 
AAACAACTATCCATGTGGCTGACC        CGTTCAGTACAATTTGGCTCAGTG
  umc1974      8.02                 BE050897 
ACAAGGAGACCCTCCTCAGCTAGT        GTAAGCTGTGGCCATACTACCACC
  umc2004      8.02 
TTCTTGGTGAGCCACTATTATTGC        AGGCGCTCAGCACTACTACACAT
  umc1807      8.03 
CAGAAGTTGCGTTTATGCTACCAC        GGTATTTTCTAATCAACGCTCACCTC
  umc1868      8.03 
CCATCATGGAGTTGCGGTTATTTA        CCCATAGAGTGCTTGAAATTGTTGA
  umc1904      8.03 
CAGCCACTCGTTTATGGAGGTTTA        TGTTACTAGTCGATCTGATGCCCA
  umc1910      8.03 
AGCTCACGAGACAGAGCAGAAAAT        TGAATTGATGAGTGACGAGTTGTG
  umc1984      8.03                 BE050190 
CTCTGGCCTCTGATACCAGTTGAT        CATCCTCCTGCAGCTGTTAACTC
  umc1858      8.04 
GTTGTTCTCCTTGCTGACCAGTTT        ATCAGCAAATTAAAGCAAAGGCAG
  umc1846      8.05 
ATTATTGGTCACAGGCCCTACCTT        TTAGGCCCTCGTCTTGTAGACTTG
  umc1864      8.05 
TGTTGACTTGAGCTTGCTGTTTTC        CCAAGGTCTTCAAAAATTCTGACC
  umc1882      8.05 
ATCCTTTCGAAATATCCCCTTTCA        AAAAGGTGCGCCACATTGTTTA
  umc1889      8.05 
CCAATGTGCTGACGAACCATT           TCACCCTCCTTCTATGTTGTCCAT
  umc1950      8.05                 AJ278664 
AACCGTTGTCGTTGTCTCTGTTC         ATGAACTTGGTCACGCTCATCTC
  umc1959      8.05                 BE186273 
AAGAAGGCCGGGAGAAGAAAG           ATCCTACTACCACCAACCTTGCAC
  umc1960      8.05                 BE130075 
CTGCTGGACTACATGGTGGACTT         GAGCTGTAGCACCCCCAAAAC
  umc1828      8.06 
ACATGACCAAGCCATCATTCTACA        CCCTTTCCATCTTTATCCCTCATC
  umc1905      8.06 
GGTGTCAACGACAGACTAGCACAT        CATTTCTCCTGTTGTTGTGTCTGG
  umc1997      8.06                 AF228486 
GTTCCAATGAGATGAGACGATGTG        CTCCAAAAAGGCCGTCGTAGTA
  umc2014      8.06 
CATTTCACGAGCTCTAGAGAGGGA        AGTACAAGAAGGCATGGAGCTCAG
  umc1607      8.07                 AQ844599 
ACTAATTTTCGGTAGTCGTGTGCG        GGAAAGAGAGAGGCTGTAGGTGGT
  umc1933      8.08 
CGGAAAGACATGAAGCACACTATG        CACGGAGAAAGTGGGTCTATATGC
  umc1916      8.09 
AGCTGGCCCTGTTCTTCACAG           CAACAATTCTGGCCCACCAAG
  umc1957      9.00                 BE186437 
CATGATCGCCGGGATTAATACTAC        GTCCAAGGACGACGATTACGAC
  umc1809      9.01 
ACTCTTCTTCTTCCACCGGGAC          GTCGGACTCGAGAAACGACG
  umc1867      9.01 
TGGTCTTCTTCGCCGCATTAT           ATAAGCTCGTTGATCTCCTCCTCC
  umc1893      9.02 
TCCAGTGCCACCCCTAGATAGTAA        ACCCCAGAGTATCTCATCACCCTT
  umc1958      9.02                 BE186285 
TTTTTGTGCTCGTCTGATTTCTTG        AGACCAATGCAACTCCTACAGACC
  umc1967      9.02                 BE051900 
ATAAGTCCGTTCGTTGAAGGCAG         GACGACCATGAAGAGGAAGATGAC
  umc1700      9.03 
AACGTAGGTAGGGTTTGGATTTCA        ACATGATGCTTGTTCCTTTTCACA
  umc1743      9.03                 AW257910 
TGGACTTCGAAAATTCTCTTCAGC        GAGAGGAGGAGCTTCACGAGC
  umc1921      9.03 
AGATCTCCCTTTTTGTAGATGGGG        AGGGTGCACTTTTATTGAGGAGTG
  umc1878      9.04 
GACCTTAAGTGCCAAACGTCACAT        GCTAATGATCGGGTGGAAAGTATG
  umc1982      9.05- 9.06           BE050312 
TTCATCTTCCTAGTCTCGTCTCCG        AATCGTACTTGGAGGAGGCGTT
  umc1789      9.07                 AW267353 
ACCTCTCCTTTTTCCTCGCCTT          GTCAGAGAAGAGGCCGGGTC
  umc1942      9.07 
GAGCCCAAGATCATCACGGT            TCGTCCTCATCTTCCTCCTCTTC
  umc1714      9.07- 9.08           AW566364 
CAAGGGCTCTTGCTCTTGAACTAA        CGACGACCTTAATTGTGTTCCTTT
  umc1739     10.03                 AW433480 
CAAAAAGCTTTAGTTTTTACAGGCAGA     GCGTGTAATTTGCTCCTTCTTCTT
  umc1863     10.03 
GATTTCCTCACTCACATACCGCTC        TACTGTACAGCATCACAACTCGGG
  umc1866     10.03 
AAGTTGGAATAATTCGGGCAGTTC        GGTAGCAGTAGGAGCAGAGGTGTG
  umc1938     10.03 
AAGGATCTGACCAGATGTTTCCG         AGCTTTCCAGCAAATGTCAGATTC
  umc1962     10.03                 BE123254 
ATAAGTGGGGGAGGCGAGCTA           GAGAACCAACCACCAAAGAAGTCC
  umc1697     10.04 
CAACACGTACGAAGCGCAGTC           TGCAGCTACCAAGTTAGCAGGAAC
  umc1827     10.04 
GCAAGTCAGGGAGTCCAAGAGAG         CCACCTCACAGGTGTTCTACGAC
  umc1836     10.04 
TGACAGGGAGCACAGAAACAATAG        GGTCTTCTCCCCCTCATTCTCTT
  umc1873     10.04 
ATATTCGAAAAGCGCCAACAAGAT        GTAACTGAGATGGAAGGGTCGATG
  umc1898     10.04 
ACGAGCAGCAGTCTCTTGGG            ACATGGGGCACAAGAAGCAAT
  umc1911     10.04 
CCCGGAAGCTGTTTTCTTTTTAAT        CGATCTGGAACGTAAGGATCATCT
  umc1995     10.04                 AW787649 
AAACAATTGTCATCTTCTTCTGCG        GTCAGACCGACGCACTCACTAA
  umc2003     10.04 
CTCATCGGTTAGCAGCAGCAG           GTTCTTAATCGGCACTCCTCGTC
  umc1993     10.06                 AW927465 
CTTTTCTGCTACTCCTGCCTGC          CTAGCTGATGGAGGCTGTAGCG
  umc1877     10.07 
AATGGTCTGACGATAGACCTCCAG        ACGGTCCCTAACCCTAAGAGAGAC
*** END OF QUERY RESULTS  ***


2. 12 MAP UPDATES
              Bins                  GenBank               PrimerF 
PrimerR
  ----------  --------------------  -------------------- 
------------------------------  ------------------------------
  umc1770      1.05                 AW330630 
GAGGGATCATGGCTCTCTTCC           GTCCATCATCAGCCTGTCACC
  umc1667      4.08 
AAACATACCCCACCACTGCAAG          CGAAGAACATGTAACACAGCAACC
  umc1001      7.03                 G42327 
GCTACCCGCGGACATATAAT            CCATGGGTAAAAACCCTACAGTG
  umc1593      7.03- 7.04 
CATGTTGATCATATGCACGAGAGA        CAGCCTGGTGACTCATGGTTAAT
  umc1414      8.01                 AI770529 
CGATCATCTCTCACTCTCTCGTCA        GTTGACGACGTCTGGCTCCT
  umc1034      8.03                 G44395 
GTGTTTCCGTTTCGCTGATTTTAC        TCATCCATGTGACAGAGACGACTT
  umc1802      8.04 
TTCCTGACAAGAAAAATATAACAGTGG     TTTCACAGTAGTGTCAGAAAGAGTTCA
  umc1675      9.07 
GTTCTTCCTCTTCCCCATCAGTCT        ATAGCTGCGCGTAAAGCAACC
  umc1804      9.07 
GCGGCGAGGTTAAAGGAAAA            GGTGTTTAGACACGCAGACACAAC
  umc1677     10.04 
TGCAGCAAGTTTGGCTACTGC           CTCTTGATGCCGTTGAAGAAGG
  umc1678     10.04 
GTAGAGATCGATTCGCTAACCTGC        AGTTGTTCCGTTCCGTCCTTATC
  umc1477     10.05                 AI770786 
GAAGCCGCAGAACATCCTCTT           AAGCTGTACACGTCGCCTTCC
*** END OF QUERY RESULTS  ***







More information about the Maize mailing list