pUC13 sequence
Paul Walden
walden at mcclb0.med.nyu.edu
Mon Jun 29 18:17:16 EST 1992
In article <01GLS6B9PB6O8WW39O at epavax.rtpnc.epa.gov>, MASS at herlvx.rtpnc.epa.gov ("Marc J. Mass") writes:
> Can anyone send the nucleotide sequence of pUC13 to me?
>
> Many thanks,
>
> MJ Mass, Ph.D.
Here is the sequence of pUC13 from Vecbase.
*****************************************************************************
Paul Walden, Ph.D.
Department of Biochemistry
550 First Avenue
New York University Medical Center
New York
NY 10016 Internet: WALDEN at MCCLB0.MED.NYU.EDU
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DC;PUC13 - pUC13 - Cloning vector
ENTRY PUC13 #TYPE DNA CIRCULAR
TITLE pUC13 - Cloning vector
DATE 17-SEP-1986
#sequence 16-DEC-1986
ACCESSION VB0024
SOURCE artificial
REFERENCE
#number 1
#authors Vieira J., Messing J.
#journal Gene (1982) 19: 259-268
#comment see "note added in proof"
REFERENCE
#number 2
#authors Pouwels P.H., Enger-Valk B.E., Brammar W.J.
#book Cloning Vectors, Elsvier 1985 and supplements
#comment vector I-A-iv-20
COMMENT
Assembled from pUC19 and M13mp11 by F. Pfeiffer, MPI, Martinsried
Revised 16-DEC-1986 by F. Pfeiffer:
2302/3 "AT" to "TA" to match revised sequence of PBR322
The strand shown contains the beta-galactosidase mRNA sequence
including the multiple cloning site of M13mp11.
KEYWORDS
CROSSREFERENCE
#complement
VecBase(3):pUC13c
#parent
VecBase(3):pUC9, VecBase(3):M13mp11, VecSource(3):bGal13
#brother
VecBase(3):pUC12
#offspring
VecBase(3):pUC19, VecBase(3):pUC19c,
VecBase(3):pSP65, VecBase(3):pGEM2, VecBase(3):pT713
PARENT
Features of pUC13 (2680 bp)
residue source
1- 441 6002-6442 M13mp11
1- 230 1069-1298 Lac-Operon
233- 283 1- 51 polylinker of M13mp11
284- 441 1304-1461 Lac-Operon
442- 541 2351-2252 (c) pBR322
542- 678 2210-2074 (c) pBR322
679-2680 4355-2354 (c) pBR322
Conflict (cfl) and Mutations (mut):
pUC13 source
mut 1122 T C 3912 (c) pBR322
mut 1423 A G 3611 (c) pBR322
FEATURE
946-1734 1-789 Ap-R; b-lactamase
POLYLINKER HindIII-PstI-SalI-XbaI-BamHI-SmaI-SacI-EcoRI
SELECTION
#resistance Ap
#indicator beta-galactosidase
SUMMARY pUC13 #length 2680 #checksum 217
SEQUENCE
Puc13 Length: 2680 June 29, 1992 18:12 Type: N Check: 217 ..
1 GCGCCCAATA CGCAAACCGC CTCTCCCCGC GCGTTGGCCG ATTCATTAAT
51 GCAGCTGGCA CGACAGGTTT CCCGACTGGA AAGCGGGCAG TGAGCGCAAC
101 GCAATTAATG TGAGTTAGCT CACTCATTAG GCACCCCAGG CTTTACACTT
151 TATGCTTCCG GCTCGTATGT TGTGTGGAAT TGTGAGCGGA TAACAATTTC
201 ACACAGGAAA CAGCTATGAC CATGATTACG CCAAGCTTGG GCTGCAGGTC
251 GACTCTAGAG GATCCCCGGG CGAGCTCGAA TTCACTGGCC GTCGTTTTAC
301 AACGTCGTGA CTGGGAAAAC CCTGGCGTTA CCCAACTTAA TCGCCTTGCA
351 GCACATCCCC CTTTCGCCAG CTGGCGTAAT AGCGAAGAGG CCCGCACCGA
401 TCGCCCTTCC CAACAGTTGC GCAGCCTGAA TGGCGAATGG CGCCTGATGC
451 GGTATTTTCT CCTTACGCAT CTGTGCGGTA TTTCACACCG CATATGGTGC
501 ACTCTCAGTA CAATCTGCTC TGATGCCGCA TAGTTAAGCC AGCCCCGACA
551 CCCGCCAACA CCCGCTGACG CGCCCTGACG GGCTTGTCTG CTCCCGGCAT
601 CCGCTTACAG ACAAGCTGTG ACCGTCTCCG GGAGCTGCAT GTGTCAGAGG
651 TTTTCACCGT CATCACCGAA ACGCGCGAGA CGAAAGGGCC TCGTGATACG
701 CCTATTTTTA TAGGTTAATG TCATGATAAT AATGGTTTCT TAGACGTCAG
751 GTGGCACTTT TCGGGGAAAT GTGCGCGGAA CCCCTATTTG TTTATTTTTC
801 TAAATACATT CAAATATGTA TCCGCTCATG AGACAATAAC CCTGATAAAT
851 GCTTCAATAA TATTGAAAAA GGAAGAGTAT GAGTATTCAA CATTTCCGTG
901 TCGCCCTTAT TCCCTTTTTT GCGGCATTTT GCCTTCCTGT TTTTGCTCAC
951 CCAGAAACGC TGGTGAAAGT AAAAGATGCT GAAGATCAGT TGGGTGCACG
1001 AGTGGGTTAC ATCGAACTGG ATCTCAACAG CGGTAAGATC CTTGAGAGTT
1051 TTCGCCCCGA AGAACGTTTT CCAATGATGA GCACTTTTAA AGTTCTGCTA
1101 TGTGGCGCGG TATTATCCCG TATTGACGCC GGGCAAGAGC AACTCGGTCG
1151 CCGCATACAC TATTCTCAGA ATGACTTGGT TGAGTACTCA CCAGTCACAG
1201 AAAAGCATCT TACGGATGGC ATGACAGTAA GAGAATTATG CAGTGCTGCC
1251 ATAACCATGA GTGATAACAC TGCGGCCAAC TTACTTCTGA CAACGATCGG
1301 AGGACCGAAG GAGCTAACCG CTTTTTTGCA CAACATGGGG GATCATGTAA
1351 CTCGCCTTGA TCGTTGGGAA CCGGAGCTGA ATGAAGCCAT ACCAAACGAC
1401 GAGCGTGACA CCACGATGCC TGTAGCAATG GCAACAACGT TGCGCAAACT
1451 ATTAACTGGC GAACTACTTA CTCTAGCTTC CCGGCAACAA TTAATAGACT
1501 GGATGGAGGC GGATAAAGTT GCAGGACCAC TTCTGCGCTC GGCCCTTCCG
1551 GCTGGCTGGT TTATTGCTGA TAAATCTGGA GCCGGTGAGC GTGGGTCTCG
1601 CGGTATCATT GCAGCACTGG GGCCAGATGG TAAGCCCTCC CGTATCGTAG
1651 TTATCTACAC GACGGGGAGT CAGGCAACTA TGGATGAACG AAATAGACAG
1701 ATCGCTGAGA TAGGTGCCTC ACTGATTAAG CATTGGTAAC TGTCAGACCA
1751 AGTTTACTCA TATATACTTT AGATTGATTT AAAACTTCAT TTTTAATTTA
1801 AAAGGATCTA GGTGAAGATC CTTTTTGATA ATCTCATGAC CAAAATCCCT
1851 TAACGTGAGT TTTCGTTCCA CTGAGCGTCA GACCCCGTAG AAAAGATCAA
1901 AGGATCTTCT TGAGATCCTT TTTTTCTGCG CGTAATCTGC TGCTTGCAAA
1951 CAAAAAAACC ACCGCTACCA GCGGTGGTTT GTTTGCCGGA TCAAGAGCTA
2001 CCAACTCTTT TTCCGAAGGT AACTGGCTTC AGCAGAGCGC AGATACCAAA
2051 TACTGTCCTT CTAGTGTAGC CGTAGTTAGG CCACCACTTC AAGAACTCTG
2101 TAGCACCGCC TACATACCTC GCTCTGCTAA TCCTGTTACC AGTGGCTGCT
2151 GCCAGTGGCG ATAAGTCGTG TCTTACCGGG TTGGACTCAA GACGATAGTT
2201 ACCGGATAAG GCGCAGCGGT CGGGCTGAAC GGGGGGTTCG TGCACACAGC
2251 CCAGCTTGGA GCGAACGACC TACACCGAAC TGAGATACCT ACAGCGTGAG
2301 CTATGAGAAA GCGCCACGCT TCCCGAAGGG AGAAAGGCGG ACAGGTATCC
2351 GGTAAGCGGC AGGGTCGGAA CAGGAGAGCG CACGAGGGAG CTTCCAGGGG
2401 GAAACGCCTG GTATCTTTAT AGTCCTGTCG GGTTTCGCCA CCTCTGACTT
2451 GAGCGTCGAT TTTTGTGATG CTCGTCAGGG GGGCGGAGCC TATGGAAAAA
2501 CGCCAGCAAC GCGGCCTTTT TACGGTTCCT GGCCTTTTGC TGGCCTTTTG
2551 CTCACATGTT CTTTCCTGCG TTATCCCCTG ATTCTGTGGA TAACCGTATT
2601 ACCGCCTTTG AGTGAGCTGA TACCGCTCGC CGCAGCCGAA CGACCGAGCG
2651 CAGCGAGTCA GTGAGCGAGG AAGCGGAAGA
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