Looking for dicot codon usage table
Francis Ouellette
francis at monod.Biol.McGill.CA
Mon May 10 17:35:15 EST 1993
ez005587 at chip.ucdavis.edu (David J. Meyer) writes:
> I am looking to find a codon usage table for dicot plant (nuclear
>genes). Any site accessible by gopher or anonymous ftp (or heck, even a
>reference to a publication) would work. Thanks in advance!
Dear David,
This looks like a job for gopher!!!
follow me:
gopher ftp.bio.indiana.edu
--> 5. IUBio-Software+Data/
--> 9. Molecular biology/
--> 4. codon/
--> 1. Codon.readme [18Feb93, 2kb].
2. algae.cod [ 1Aug91, 6kb].
3. anopheles.codons/
4. asn.cod [14May91, 4kb].
5. ath.cod [14May91, 4kb].
6. bly.cod [14May91, 4kb].
7. bmo.cod [14May91, 4kb].
.
.
.
and many many more ... in the readme file you find:
(I may have missed some ... my botany is a bit dusty!)
File Name Organism/Organelle
======================================================
PEA.COD Pisum sativum (Pea)
PET.COD Petunia sp.
PHV.COD Phaseolus vulgaris (Lima bean)
POT.COD Solanum tuberosum (Potatoe)
SOY.COD Glycine max (Soybean)
TOB.COD Nicotiana tabacum (Tobacco)
TOBCP.COD Nicotiana tabacum chloroplast (Tobacco)
TOM.COD Lycopersicon esculentum (Tomato)
As Dan "the Man" Jacobson would say ... "if you do not know about
gopher ... don't worry, it is free and on the net"
Ask him (danj at welchgate.welch.jhu.edu) or me, and we will send you an
info (abriged gopher_FAQ) about gopher,
regards,
francis
PS This info also available by anonymous FTP (same address)
--
| B.F. Francis Ouellette * francis at monod.biol.mcgill.ca *
|
| "Je cherche a` comprendre" Jacques Monod
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