RNA structure prediction
jgraham at bronze.ucs.indiana.edu
Thu Sep 23 16:46:15 EST 1993
In <930922101416.685d at UTBC01.CM.UTEXAS.EDU> APPLING at UTBC01.CM.UTEXAS.EDU writes:
>We would like to try to predict the secondary structure of the 5' end of a
>rat mRNA. Are there any good programs out there, and if so, where can we
>get one? Thanks.
Check out some of Don Gilberts work on Macintosh versions of the Zuker
predicition program "multifold". His Mac port is called "Mulfold" and
can be obtained at our ftp site "iubio.bio.indiana.edu" which is also
accessible through most biology gopher servers.
Don also provides several programs for handling the graphic output from
this prediciton, including "LoopViewer" which while quite rough, can
eventually lead to some great graphics.
More information about the Methods