A grinding problem
jimbo
ferguson at oci.utoronto.ca
Mon May 16 11:54:47 EST 1994
In article <1994May16.045337.13334 at midway.uchicago.edu>,
sferguso at kimbark.uchicago.edu (Stacy Ferguson) writes:
> In article <2qlrn5$n3r at bigboote.WPI.EDU> jbagshaw at wpi.WPI.EDU (Joseph
> C. Bagshaw) writes:
> >This is my second attempt to post this message. The first did't
> >get through, I'm a novice, and the local college computer center
> >speaks no known human language. Sorry for the noise.
> >
> >I have a problem for which someone out there may have a solution.
> >I need to prepare genomic DNA from frozen tissue (shrimp tails,
> >to be specific). The first step is to reduce the tail muscle,
> >still frozen, to as fine a powder as possible. Currently, I wrap the
> >tail in two or three layers of foil, place it on a metal block
> >on dry ice, and pound it with a hammer. This reduces the tail to
> >small chunks, which I then grind in a mortor and pestle on dry ice
> >until my arm aches. From there on the DNA extraction in a breeze, and
> >I get super quality DNA. This crude but effective pulverizing method
> >is OK for a limited number of samples, but the prospect of doing a few
> >dozen shrimp this way is pretty daunting. I'm looking for an
> >alternative that would facilitate rigorous grinding of
> >multilpe samples. Any suggestions would be appreciated.
> >
> >Joe Bagshaw
> >Department of Biology and Biotechnology
> >Worcester Polytechnic Institute
> >Worcester, MA 01609
> >jbagshaw at wpi.wpi.edu
> >
> >********************HAVE GENES, WILL TRAVEL********************
> >
> >
>
> First, I'm glad to see you're using a part of the shrimp that most
> people don't eat anyway. I'd hate to see good shrimp go to waste :)
>
> Will a Waring Blendor work? You can usually find them in big scientific
> supply catalogues like Fischer, Baxter, etc. You can buy small blender
> cups for scientific use. I've made liver powders and things like that
> using frozen tissue and dry ice for DNA preps. The only problem with
> this is that the cups aren't cheap, so if you plan on doing pcr or
> something where minor contamination would be a huge problem, then it
> would be prohibitively expensive to buy one cup per prep. The cup I
> used held about 50 ml but I know they come in smaller sizes.
>
> Stacy
I used to know someone who extracted plant metabolites in a mortar and pestle
along with liquid nitrogen. She said that this made the frozen plant
material more brittle than dry ice did. You could give it a try.
More information about the Methods
mailing list