Nuclear Factor-DNA Binding Motifs

skoufos at nefeli.imbb.forth.gr skoufos at nefeli.imbb.forth.gr
Tue Nov 15 10:42:24 EST 1994


In article <Johnson-1411941906010001 at med-bcmm-kstar-node.med.yale.edu>, Johnson at biomed.yale.edu (David Johnson) writes:
>   Is there a database/search program available that can search for
>nuclear factor binding motifs in a given DNA sequence?  


GCG has a list of transcription factor binding sites in the file TFSites.Dat
You need to FETCH this file and give it as data to FIND, MAP, MAPSORT, and
MAPPLOT.  In addition references for each binding site are given in the file.

I hope this is of help.

Emmanuel



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